RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 HTR3AP46098 478 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 GSG1Q2KHT4 349 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SPDYE7PQ495Y7 208 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 BRD3OSQ6XYD6 125 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 TRIM46Q7Z4K8 759 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CCDC36Q8IYA8 594 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 OR56A1Q8NGH5 318 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 MGARPQ8TDB4 240 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SNX33Q8WV41 574 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 WWC2-AS2Q96NR7 200 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 PRDM13Q9H4Q3 707 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 ACSS3Q9H6R3 686 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SAP30LQ9HAJ7 183 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 NPHS2Q9NP85 383 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 MID1IP1Q9NPA3 183 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CCL27Q9Y4X3 112 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 FRS3O43559 492 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 SHOX2O60902 331 aaPredicted RBP11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 PTDSS1P48651 473 aaKnown RBP11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 CLDN17P56750 224 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 PAX8Q06710 450 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 OXLD1Q5BKU9 147 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 RGS7BPQ6MZT1 257 aaPredicted RBP11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 CMIPQ8IY22 773 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 KDM8Q8N371 416 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 ARFGAP2Q8N6H7 521 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 PPP1R14AQ96A00 147 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 CCT7Q99832 543 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 GPR160Q9UJ42 338 aa11.53□□□□□ -0.56
EXOSC3-207ENST00000490516 IGLV3-9A0A075B6K5 115 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF99A8MXY4 864 aaPredicted RBP11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 SLC43A1O75387 559 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 FAM157BP0CG42 384 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 IMPDH1P20839 514 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 CDC25BP30305 580 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 GLO1Q04760 184 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 Q6YL49 198 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 OR7A2PQ8NGA2 310 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 OR10S1Q8NGN2 331 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 DCAKDQ8WVC6 231 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 CNOT9Q92600 299 aaKnown RBP11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 SGCDQ92629 289 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ZG16BQ96DA0 208 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ELMOD3Q96FG2 381 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 RRAGDQ9NQL2 400 aaPredicted RBP11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 NECAP2Q9NVZ3 263 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 EGFL7Q9UHF1 273 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 SLC7A8Q9UHI5 535 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 STK38LQ9Y2H1 464 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 DNAH3Q8TD57 4116 aa11.52□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 VAMP5O95183 116 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 C6orf47O95873 294 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 SBK2P0C263 348 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 MYZAPP0CAP1 466 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF250P15622 560 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 TAC1P20366 129 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 PTMSP20962 102 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 SLC6A9P48067 706 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 GIPRP48546 466 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 SELENOVP59797 346 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 BNIP2Q12982 314 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 RAB39AQ14964 217 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 ARHGAP11BQ3KRB8 267 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 PHYHD1Q5SRE7 291 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF620Q6ZNG0 422 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 R3HCC1LQ7Z5L2 792 aaKnown RBP11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 LRRC8AQ8IWT6 810 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 PSMA8Q8TAA3 256 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 SYNPRQ8TBG9 265 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 TAPBPLQ9BX59 468 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 GSTO2Q9H4Y5 243 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 TNFRSF12AQ9NP84 129 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 DCAF16Q9NXF7 216 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF224Q9NZL3 707 aa11.51□□□□□ -0.57
EXOSC3-207ENST00000490516 UBOX5O94941 541 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 MELTFP08582 738 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 OR8G3PP0DMU2 310 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 LAMP1P11279 417 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 AQP5P55064 265 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 RAB1AP62820 205 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 KCNJ10P78508 379 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 AP1ARQ63HQ0 302 aa11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 TYW3Q6IPR3 259 aaKnown RBP11.5□□□□□ -0.57
EXOSC3-207ENST00000490516 ZNF584Q8IVC4 421 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms