RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SLC7A2P52569 658 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 NUDT6P53370 316 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 CRYBA2P53672 197 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 OR2B6P58173 313 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 PSME3P61289 254 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 H3F3AP84243 136 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 LIPEQ05469 1076 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 RAB35Q15286 201 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 C8orf82Q6P1X6 216 aaPredicted RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 CASP12Q6UXS9 341 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 CCDC80Q76M96 950 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 PRIMA1Q86XR5 153 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 RBM45Q8IUH3 476 aaKnown RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 SLC30A8Q8IWU4 369 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 PIAS4Q8N2W9 510 aaPredicted RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 MUC15Q8N387 334 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 C3orf49Q96BT1 292 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 HOPXQ9BPY8 73 aaPredicted RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 BTBD10Q9BSF8 475 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 AMBRA1Q9C0C7 1298 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 SLC25A15Q9Y619 301 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 PMF1-BGLAPU3KQ54 211 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 A0A1B0GWA3 101 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 ELOVL7A1L3X0 281 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 H7C417 338 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 M0R3H8 397 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 NME4O00746 187 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 LGI1O95970 557 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 CD8AP01732 235 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 IGHV4-39P01824 125 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 T-ENOLP0DO92 83 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 IMPDH2P12268 514 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 SLC25A16P16260 332 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 MPGP29372 298 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 PRPS1P60891 318 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 SLC17A1Q14916 467 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 OR1Q1Q15612 314 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 NPTX1Q15818 432 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 INTS11Q5TA45 600 aaKnown RBP9.1□□□□□ -0.95
TTC28-207ENST00000490475 ERICH5Q6P6B1 374 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 HACD2Q6Y1H2 254 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 ATG4DQ86TL0 474 aaPredicted RBP9.1□□□□□ -0.95
TTC28-207ENST00000490475 CCDC103Q8IW40 242 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 MICU2Q8IYU8 434 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 BHLHE22Q8NFJ8 381 aaPredicted RBP9.1□□□□□ -0.95
TTC28-207ENST00000490475 OR2T12Q8NG77 320 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 OR52E4Q8NGH9 312 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 OR4D11Q8NGI4 311 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 OR52N5Q8NH56 324 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 SLC26A7Q8TE54 656 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 SLC35B4Q969S0 331 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 TMEM45BQ96B21 275 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 BOD1Q96IK1 185 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 NSL1Q96IY1 281 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 TAPBPLQ9BX59 468 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 RPS6KB2Q9UBS0 482 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 SLC13A4Q9UKG4 626 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 FLVCR1Q9Y5Y0 555 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
TTC28-207ENST00000490475 CR1P17927 2039 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 A6NHS1 94 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 A8MVM7 634 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 FAM220BPB1ANY3 271 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 TMEM229AB2RXF0 380 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 SSX4O60224 188 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 RAMP1O60894 148 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 KRT33AO76009 404 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 C8BP07358 591 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 APOBEC3AP31941 199 aaPredicted RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 KDELR2P33947 212 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 GSK3BP49841 420 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 FABP6P51161 128 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 ZNF83P51522 516 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 SH3BGRP55822 239 aaPredicted RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 RGS8P57771 180 aaPredicted RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 CEACAM7Q14002 265 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 TAF11Q15544 211 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 GABRA6Q16445 453 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 DNAL1Q4LDG9 190 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 OTUD3Q5T2D3 398 aaPredicted RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 TMEM225Q6GV28 225 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 CXXC5Q7LFL8 322 aaKnown RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 HIPK1Q86Z02 1210 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 LSMEM1Q8N8F7 131 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 OR6T1Q8NGN1 323 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 VANGL1Q8TAA9 524 aaPredicted RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 NEUROG1Q92886 237 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 UTP4Q969X6 686 aaKnown RBP9.09□□□□□ -0.95
TTC28-207ENST00000490475 MCHR1Q99705 422 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 ARHGDIGQ99819 225 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 KCNS3Q9BQ31 491 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 CACNG6Q9BXT2 260 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 C1orf21Q9H246 121 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 VCXQ9H320 206 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 TMEM27Q9HBJ8 222 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 SLC17A5Q9NRA2 495 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms