RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 RPS6KB2Q9UBS0 482 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PMF1-BGLAPU3KQ54 211 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MALRD1Q5VYJ5 2156 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TRAV36DV7A0A075B6V5 113 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 A0A087WUJ7 227 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 A8MV72 311 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 AIM2O14862 343 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OR2T1O43869 369 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CELA3BP08861 270 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 HLA-DOBP13765 273 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 HOXB1P14653 301 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CBLP22681 906 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PPIBP23284 216 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ATP4BP51164 291 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ADIPOQQ15848 244 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 AGKQ53H12 422 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ALG10BQ5I7T1 473 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 FAM91A1Q658Y4 838 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 HMBOX1Q6NT76 420 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ULK3Q6PHR2 472 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ATP6V1G3Q96LB4 118 aa16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CPPED1Q9BRF8 314 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-202ENST00000489921 A0A0B4J2E0 115 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 A0A1B0GX12 115 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC43A1O75387 559 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MFN2O95140 757 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 BGLAPP02818 100 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PAX7P23759 505 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SERPINF1P36955 418 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SH3BGRP55822 239 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 UBE2NP61088 152 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 HGFACQ04756 655 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SCARB2Q14108 478 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OR1Q1Q15612 314 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 RUNDC3AQ59EK9 446 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 C5orf46Q6UWT4 87 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 NET1Q7Z628 596 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PTOV1Q86YD1 416 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ADPRHL1Q8NDY3 354 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OR6S1Q8NH40 331 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PROX1Q92786 737 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CRLF2Q9HC73 371 aa16.85■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CRYAAP02489 173 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 IGHV4-31P0DP07 118 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 BMP4P12644 408 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CBR1P16152 277 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC6A2P23975 617 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 GTF2E2P29084 291 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 AQP1P29972 269 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PCBP3P57721 371 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CEACAM16Q2WEN9 425 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 LINC00114Q6XXX2 140 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 KRT73Q86Y46 540 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SPATA3Q8NHX4 192 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC47A1Q96FL8 570 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MOGAT1Q96PD6 335 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SPATA5L1Q9BVQ7 753 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PLK3Q9H4B4 646 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF385DQ9H6B1 395 aa16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TESQ9UGI8 421 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1B-202ENST00000489921 LRRN3E7EW58 273 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CSF3P09919 207 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 OR4A8P0C604 315 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CDH12P55289 794 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 C1DQ13901 141 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SELPLGQ14242 412 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SQLEQ14534 574 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 EFNB3Q15768 340 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RETREG3Q86VR2 466 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 C20orf196Q8IYI0 205 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ANKS4BQ8N8V4 417 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NUP37Q8NFH4 326 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TXNDC15Q96J42 360 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF607Q96SK3 696 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 EMC6Q9BV81 110 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 B3GNT2Q9NY97 397 aa16.83■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TMEM129A0AVI4 362 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PRORSD1PA6NEY8 169 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 B9A039 149 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PDE5AO76074 875 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 THY1P04216 161 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IGFBP1P08833 259 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 USF1P22415 310 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RGS8P57771 180 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NPTX1Q15818 432 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 DUSP7Q16829 419 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ARMC8Q8IUR7 673 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 GPR137CQ8N3F9 429 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SMYD1Q8NB12 490 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 HIPK4Q8NE63 616 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PIK3C3Q8NEB9 887 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 GPR32P1Q8NGA4 272 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 STON2Q8WXE9 905 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF75AQ96N20 296 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ARHGDIGQ99819 225 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TMEM27Q9HBJ8 222 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CORO2BQ9UQ03 480 aa16.82■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IGHV2OR16-5A0A0B4J2B6 119 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF99A8MXY4 864 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms