RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LOC102725191A0A1B0GVB3 256 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 A0A1W2PR80 420 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 C11orf98E9PRG8 122 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 MS4A18H0YCH9 400 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 ATE1O95260 518 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 SERPINA1P01009 418 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 IFNW1P05000 195 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.53
CCL28-202ENST00000489442 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 GABRA6Q16445 453 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 MS4A18Q3C1V0 323 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 VTCN1Q7Z7D3 282 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 TSPYL5Q86VY4 417 aaPredicted RBP11.77□□□□□ -0.53
CCL28-202ENST00000489442 LURAP1LQ8IV03 231 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 C1orf162Q8NEQ5 155 aaPredicted RBP11.77□□□□□ -0.53
CCL28-202ENST00000489442 MUS81Q96NY9 551 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 ALKBH3Q96Q83 286 aaPredicted RBP11.77□□□□□ -0.53
CCL28-202ENST00000489442 FOXC2Q99958 501 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 ABCD2Q9UBJ2 740 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 RPS6KA6Q9UK32 745 aa11.77□□□□□ -0.53
CCL28-202ENST00000489442 ZNF726A6NNF4 738 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PDLIM1O00151 329 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PLPP3O14495 311 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 FZD7O75084 574 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 UPK3AO75631 287 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 LYPD3O95274 346 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 FAM107AO95990 144 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 WNT11O96014 354 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PLAUP00749 431 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 THRBP10828 461 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 NCK1P16333 377 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 LOXP28300 417 aaPredicted RBP11.76□□□□□ -0.53
CCL28-202ENST00000489442 RBM34P42696 430 aaKnown RBP11.76□□□□□ -0.53
CCL28-202ENST00000489442 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
CCL28-202ENST00000489442 ZNF83P51522 516 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 MNAT1P51948 309 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ROR2Q01974 943 aaKnown RBP11.76□□□□□ -0.53
CCL28-202ENST00000489442 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ST3GAL3Q11203 375 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ZNF74Q16587 644 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 IFI44LQ53G44 452 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 CARD17Q5XLA6 110 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 TMEM108Q6UXF1 575 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 C20orf204Q6ZNR8 217 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PXKQ7Z7A4 578 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 NKAIN4Q8IVV8 208 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 C17orf78Q8N4C9 275 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 RNF148Q8N7C7 305 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ANKS4BQ8N8V4 417 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PIK3C3Q8NEB9 887 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 TMEM255BQ8WV15 326 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 TMEM239Q8WW34 195 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
CCL28-202ENST00000489442 PIGTQ969N2 578 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 MBD6Q96DN6 1003 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 HS6ST2Q96MM7 605 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 CCL19Q99731 98 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 PRSS27Q9BQR3 290 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 FNDC11Q9BVV2 318 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 C1QTNF6Q9BXI9 259 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 FKRPQ9H9S5 495 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ARL8BQ9NVJ2 186 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 NDE1Q9NXR1 346 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 ZNF229Q9UJW7 825 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 AMDHD2Q9Y303 409 aa11.76□□□□□ -0.53
CCL28-202ENST00000489442 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 DPRXA6NFQ7 191 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 BLOC1S5-TXNDC5H3BN57 136 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 RNF13O43567 381 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 TRAF3IP2O43734 574 aaPredicted RBP11.75□□□□□ -0.53
CCL28-202ENST00000489442 HPRP00739 348 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 MT-ND1P03886 318 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 CD53P19397 219 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 TCN1P20061 433 aaPredicted RBP11.75□□□□□ -0.53
CCL28-202ENST00000489442 PRPS1P60891 318 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 C16orf89Q6UX73 402 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 CBLL1Q75N03 491 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 NANOGNBQ7Z5D8 188 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 CYP4Z1Q86W10 505 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 LRRC17Q8N6Y2 441 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 CCDC197Q8NCU1 140 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 AKAP1Q92667 903 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCL28-202ENST00000489442 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 PRRC1Q96M27 445 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 OR2M2Q96R28 347 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 TMEM204Q9BSN7 226 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 ZNF426Q9BUY5 554 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 EMC6Q9BV81 110 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 AMBRA1Q9C0C7 1298 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 B3GAT2Q9NPZ5 323 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms