RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TNFRSF1BP20333 461 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 PAX7P23759 505 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 LOXP28300 417 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-218ENST00000489037 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
BRCA1-218ENST00000489037 GSK3BP49841 420 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 PRPS1P60891 318 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 MXRA7P84157 204 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 LTBQ06643 244 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 TESK1Q15569 626 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 C8orf82Q6P1X6 216 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-218ENST00000489037 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 FKBP9P1Q75LS8 142 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 DEPDC4Q8N2C3 294 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 MOGAT1Q96PD6 335 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 TMEM204Q9BSN7 226 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 FKRPQ9H9S5 495 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 B3GAT2Q9NPZ5 323 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 TAGLN3Q9UI15 199 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 MGAT4BQ9UQ53 548 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 PLPP3O14495 311 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 HS3ST1O14792 307 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 SMPD2O60906 423 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 THY1P04216 161 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 CD53P19397 219 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 MNAT1P51948 309 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 SH3BGRP55822 239 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 UBE2NP61088 152 aaKnown RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 POU3F1Q03052 451 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 FOXD4Q12950 439 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 PIN1Q13526 163 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF74Q16587 644 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 IFI44LQ53G44 452 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 PXKQ7Z7A4 578 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 AKAP1Q92667 903 aaKnown RBP eCLIP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 RADILQ96JH8 1075 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 PRRC1Q96M27 445 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 ALKBH3Q96Q83 286 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-218ENST00000489037 CCT8L2Q96SF2 557 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 PIP5K1AQ99755 562 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 AMBRA1Q9C0C7 1298 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 SLC17A5Q9NRA2 495 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 ABCD2Q9UBJ2 740 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF229Q9UJW7 825 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 RPS6KA6Q9UK32 745 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 MED31Q9Y3C7 131 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 SLC25A15Q9Y619 301 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 CSMD2Q7Z408 3487 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 F8P00451 2351 aa12.55□□□□□ -0.4
BRCA1-218ENST00000489037 A0A1W2PR80 420 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 DPRXA6NFQ7 191 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 C11orf98E9PRG8 122 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 M0R1B8 84 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ARHGEF9O43307 516 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 RNF13O43567 381 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 UPK3AO75631 287 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 SERPINI2O75830 405 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 LYPD3O95274 346 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 PLAUP00749 431 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 SERPINA1P01009 418 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 MT-ND1P03886 318 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 PTAFRP25105 342 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF83P51522 516 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 C16orf89Q6UX73 402 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 CBLL1Q75N03 491 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 NANOGNBQ7Z5D8 188 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 CYP4Z1Q86W10 505 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ANKS4BQ8N8V4 417 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 TMEM239Q8WW34 195 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 FBXW5Q969U6 566 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 SGTBQ96EQ0 304 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 PRSS27Q9BQR3 290 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF426Q9BUY5 554 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 FNDC11Q9BVV2 318 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
BRCA1-218ENST00000489037 PLCE1Q9P212 2302 aa12.54□□□□□ -0.4
BRCA1-218ENST00000489037 SLC35F4A4IF30 521 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 HTR3EA5X5Y0 456 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 ABCD4O14678 606 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 TMCC2O75069 709 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF432O94892 652 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms