RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ZNF705GA8MUZ8 300 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 VAMP5O95183 116 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 OXSR1O95747 527 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 CSF3P09919 207 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 GKN3PP0CG01 181 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 TCN2P20062 427 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 IMPDH1P20839 514 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 MMP11P24347 488 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 HTR2AP28223 471 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 GYG1P46976 350 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 ASPHQ12797 758 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 KIR2DS1Q14954 304 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 CARD16Q5EG05 197 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 COA6Q5JTJ3 125 aaKnown RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 CES3Q6UWW8 571 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 FAM92BQ6ZTR7 304 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 UBALD2Q8IYN6 164 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 RBMXL1Q96E39 390 aaKnown RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 PDXPQ96GD0 296 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 C7orf34Q96L11 122 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 AMDHD1Q96NU7 426 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 OR2A5Q96R48 311 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 RNF2Q99496 336 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 CAPS2Q9BXY5 557 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 RWDD1Q9H446 243 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 MMP17Q9ULZ9 603 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 F11RQ9Y624 299 aaKnown RBP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 SF3B1O75533 1304 aaKnown RBP eCLIP2.3□□□□□ -2.04
PTPN4-212ENST00000488896 KDRP35968 1356 aa2.3□□□□□ -2.04
PTPN4-212ENST00000488896 MN1Q10571 1320 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-212ENST00000488896 H3BNH8 94 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 RPL36A-HNRNPH2H7BZ11 118 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 XKRYO14609 159 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 PRPS2P11908 318 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 PSMC3P17980 439 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 HMGB2P26583 209 aaKnown RBP2.29□□□□□ -2.04
PTPN4-212ENST00000488896 MAP3K8P41279 467 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 SCGB2A2Q13296 93 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 OXA1LQ15070 435 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 USH1GQ495M9 461 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 GET4Q7L5D6 327 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-212ENST00000488896 ZNF679Q8IYX0 411 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 OR1F12Q8NHA8 337 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 PELI1Q96FA3 418 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 AURKBQ96GD4 344 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-212ENST00000488896 SECISBP2Q96T21 854 aaKnown RBP2.29□□□□□ -2.04
PTPN4-212ENST00000488896 FOXC2Q99958 501 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 ZNF416Q9BWM5 594 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 OSBPL11Q9BXB4 747 aa2.29□□□□□ -2.04
PTPN4-212ENST00000488896 GPRASP1Q5JY77 1395 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 IGHV5-51A0A0C4DH38 117 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 INS-IGF2F8WCM5 200 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 PRPSAP2O60256 369 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 SRP72O76094 671 aaKnown RBP2.28□□□□□ -2.04
PTPN4-212ENST00000488896 IGHG4P01861 327 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 BGLAPP02818 100 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 UBTFL1P0CB47 393 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-212ENST00000488896 MAPK3P27361 379 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-212ENST00000488896 DDOSTP39656 456 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 RAP1AP62834 184 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 IL1RL1Q01638 556 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 VAX1Q5SQQ9 334 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 DNLZQ5SXM8 178 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 BEND3Q5T5X7 828 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 BRD3OSQ6XYD6 125 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 ZNF547Q8IVP9 402 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 MAIP1Q8WWC4 291 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 OSTF1Q92882 214 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 LRRC58Q96CX6 371 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 ZNF355PQ9NSJ1 428 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 CALYQ9NYX4 217 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 OR10H1Q9Y4A9 318 aa2.28□□□□□ -2.04
PTPN4-212ENST00000488896 TRIOBPQ9H2D6 2365 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 IGHV3-66A0A0C4DH42 116 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 TCRBV9S1A1TA0A576 114 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 MAPK13O15264 365 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 ATP5LO75964 103 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 MPZL1O95297 269 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 AP2A1O95782 977 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 AK1P00568 194 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 IGKV1D-16P01601 117 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 IGHV3-43DP0DP04 118 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 OMGP23515 440 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 VGLL4Q14135 290 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 TTLL9Q3SXZ7 439 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 CNSTQ6PJW8 725 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 NCCRP1Q6ZVX7 275 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-212ENST00000488896 LRP11Q86VZ4 500 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 FADS6Q8N9I5 356 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 IPMKQ8NFU5 416 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 TUBGCP2Q9BSJ2 902 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 RAB34Q9BZG1 259 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 GBA3Q9H227 469 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 RANBP3Q9H6Z4 567 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-212ENST00000488896 SPATA7Q9P0W8 599 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 CD84Q9UIB8 345 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 RFNGQ9Y644 331 aa2.27□□□□□ -2.05
PTPN4-212ENST00000488896 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
PTPN4-212ENST00000488896 A8MXQ7 604 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms