RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 AKAP8O43823 692 aaKnown RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 SLC43A1O75387 559 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 WNT11O96014 354 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 HPRP00739 348 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 NPPAP01160 153 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 PRPS1P60891 318 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 ROR2Q01974 943 aaKnown RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 LTBQ06643 244 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 HMBOX1Q6NT76 420 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 BIVMQ86UB2 503 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 TSPYL5Q86VY4 417 aaPredicted RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 UEVLDQ8IX04 471 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 CIARTQ8N365 385 aaPredicted RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 POU5F2Q8N7G0 328 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 SCAIQ8N9R8 606 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 PCYOX1LQ8NBM8 494 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 ADAMTS16Q8TE57 1224 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 RCN3Q96D15 328 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 SLC41A3Q96GZ6 507 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 ZNF317Q96PQ6 595 aaPredicted RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 OR2M2Q96R28 347 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 TRAF4Q9BUZ4 470 aaPredicted RBP15.53■□□□□ 0.08
ITGB1-215ENST00000488494 ALG2Q9H553 416 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 SLC7A7Q9UM01 511 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 ZFHX3Q15911 3703 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 NSD1Q96L73 2696 aaPredicted RBP15.52■□□□□ 0.08
ITGB1-215ENST00000488494 CADP27708 2225 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 TRAPPC13A5PLN9 417 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 SLC22A2O15244 555 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 LYPD3O95274 346 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 THY1P04216 161 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 HLA-DOBP13765 273 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.08
ITGB1-215ENST00000488494 POU3F1Q03052 451 aaPredicted RBP15.52■□□□□ 0.08
ITGB1-215ENST00000488494 PMS2P3Q13401 168 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 DTX2Q86UW9 622 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 TMEM123Q8N131 208 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 GPR137CQ8N3F9 429 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 RASSF5Q8WWW0 418 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 PROX1Q92786 737 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 OBP2BQ9NPH6 170 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 GID8Q9NWU2 228 aa15.52■□□□□ 0.08
ITGB1-215ENST00000488494 MRPL39Q9NYK5 338 aaKnown RBP15.52■□□□□ 0.08
ITGB1-215ENST00000488494 A0A096LPE4 126 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 LOC102725191A0A1B0GVB3 256 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 A0A1W2PPZ6 126 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 FAM220BPB1ANY3 271 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 E7EQL1 145 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 ATP6V1G2-DDX39BF2Z307 99 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 KPNA4O00629 521 aaPredicted RBP15.51■□□□□ 0.07
ITGB1-215ENST00000488494 SMAD7O15105 426 aaKnown RBP15.51■□□□□ 0.07
ITGB1-215ENST00000488494 CD8AP01732 235 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 TNFRSF1BP20333 461 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 UBE2NP61088 152 aaKnown RBP15.51■□□□□ 0.07
ITGB1-215ENST00000488494 TUBA1BP68363 451 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 TUBA4AP68366 448 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 PUDPQ08623 228 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 LRRC23Q53EV4 343 aaPredicted RBP15.51■□□□□ 0.07
ITGB1-215ENST00000488494 C1QTNF12Q5T7M4 302 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 CARD17Q5XLA6 110 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 ERICH5Q6P6B1 374 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 ANKRD16Q6P6B7 361 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 LINC00114Q6XXX2 140 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 TUBA1AQ71U36 451 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 DEPDC4Q8N2C3 294 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 PIK3C3Q8NEB9 887 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 TRMT61AQ96FX7 289 aaKnown RBP15.51■□□□□ 0.07
ITGB1-215ENST00000488494 BOD1Q96IK1 185 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 BDH2Q9BUT1 245 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 PCDHAC1Q9H158 963 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 NELFAQ9H3P2 528 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 MED29Q9NX70 200 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 USF3Q68DE3 2245 aa15.51■□□□□ 0.07
ITGB1-215ENST00000488494 MS4A18H0YCH9 400 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 SERPINI2O75830 405 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 MT-ATP6P00846 226 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 VEZF1Q14119 521 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 MS4A18Q3C1V0 323 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 AGAP6Q5VW22 663 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 CLEC9AQ6UXN8 241 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 DEF8Q6ZN54 512 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 Q71RC1 249 aaPredicted RBP15.5■□□□□ 0.07
ITGB1-215ENST00000488494 CARM1Q86X55 608 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 OR2T12Q8NG77 320 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 BCL2L2Q92843 193 aaPredicted RBP15.5■□□□□ 0.07
ITGB1-215ENST00000488494 ZNF583Q96ND8 569 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 DHRS9Q9BPW9 319 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 FKRPQ9H9S5 495 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 CRLF2Q9HC73 371 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 GPR35Q9HC97 309 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 BAG5Q9UL15 447 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 SH3GLB1Q9Y371 365 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 NOX1Q9Y5S8 564 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 ATP23Q9Y6H3 246 aa15.5■□□□□ 0.07
ITGB1-215ENST00000488494 ARPC4-TTLL3A0A0A6YYG9 625 aa15.49■□□□□ 0.07
ITGB1-215ENST00000488494 IGHV1-18A0A0C4DH31 117 aa15.49■□□□□ 0.07
ITGB1-215ENST00000488494 RPL36A-HNRNPH2H7BZ11 118 aa15.49■□□□□ 0.07
ITGB1-215ENST00000488494 M0R3G1 203 aa15.49■□□□□ 0.07
ITGB1-215ENST00000488494 PLPP3O14495 311 aa15.49■□□□□ 0.07
ITGB1-215ENST00000488494 SHOX2O60902 331 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms