RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RNF13O43567 381 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 TOXO94900 526 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ASAH2BP0C7U1 165 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 MAKP20794 623 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 CEACAM8P31997 349 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 OMPP47874 163 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 LIMS1P48059 325 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 IST1P53990 364 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 PUDPQ08623 228 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ANKDD1AQ495B1 522 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ZBED5Q49AG3 693 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 C1orf94Q6P1W5 598 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 SHQ1Q6PI26 577 aaKnown RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 SLC46A3Q7Z3Q1 461 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ZER1Q7Z7L7 766 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 LSRQ86X29 649 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 MEX3DQ86XN8 651 aaKnown RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 HIPK1Q86Z02 1210 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 UEVLDQ8IX04 471 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 GCNT2Q8N0V5 402 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 KDM8Q8N371 416 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 AQP11Q8NBQ7 271 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ADPRHL1Q8NDY3 354 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 OR51A7Q8NH64 312 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 OR5K1Q8NHB7 308 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ASB5Q8WWX0 329 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 LIPHQ8WWY8 451 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 SFXN3Q9BWM7 321 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 SEMA6AQ9H2E6 1030 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 PARPBPQ9NWS1 579 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 VNN3Q9NY84 501 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ZNF629Q9UEG4 869 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 MGAT4BQ9UQ53 548 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 NOSIPQ9Y314 301 aaKnown RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 RP1L1Q8IWN7 2480 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 GTF3C1Q12789 2109 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 A0A0G2JNJ9 132 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 LOC102725191A0A1B0GVB3 256 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 A0A1W2PNV4 684 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 A0A1W2PRG6 482 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ARRDC5A6NEK1 342 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ZNF726A6NNF4 738 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 C11orf98E9PRG8 122 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 MS4A18H0YCH9 400 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 H3BNX3 289 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 DVL2O14641 736 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SS18L1O75177 396 aaPredicted RBP9.16□□□□□ -0.94
SKA1-204ENST00000488454 MRPL33O75394 65 aaKnown RBP9.16□□□□□ -0.94
SKA1-204ENST00000488454 SERPINI2O75830 405 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 AGFG2O95081 481 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 IL18BPO95998 194 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 GASTP01350 101 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ANXA8P13928 327 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 POU2F1P14859 743 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ZNF23P17027 643 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 KLK2P20151 261 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 GSTM3P21266 225 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 FPR3P25089 353 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 CHRNB4P30926 498 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 AQP2P41181 271 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SLC16A1P53985 500 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PRPS1P60891 318 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SIRPAP78324 504 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ELF3P78545 371 aaPredicted RBP9.16□□□□□ -0.94
SKA1-204ENST00000488454 ZP4Q12836 540 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 COX10Q12887 443 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 TSPAN31Q12999 210 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SLC17A1Q14916 467 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 MS4A18Q3C1V0 323 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ABLIM2Q6H8Q1 611 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PGBD2Q6P3X8 592 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 XKRXQ6PP77 449 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 FAM214BQ7L5A3 538 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PXKQ7Z7A4 578 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 GALNT5Q7Z7M9 940 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 STK32CQ86UX6 486 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 CCDC71Q8IV32 467 aaPredicted RBP9.16□□□□□ -0.94
SKA1-204ENST00000488454 TUSC5Q8IXB3 177 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 MARVELD2Q8N4S9 558 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ATG16L2Q8NAA4 619 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 ICA1LQ8NDH6 482 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 OR9K2Q8NGE7 335 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 OR9Q2Q8NGE9 314 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 CCDC120Q96HB5 630 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 TNFRSF13CQ96RJ3 184 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 FEVQ99581 238 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PKP2Q99959 881 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PSD2Q9BQI7 771 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 PIGMQ9H3S5 423 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 TAS2R5Q9NYW4 299 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 KIF17Q9P2E2 1029 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SEC14L4Q9UDX3 406 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 Q9UFV3 132 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 RNF6Q9Y252 685 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 NOX1Q9Y5S8 564 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms