RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 RPS4XP62701 263 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 PPP1R8Q12972 351 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 C1DQ13901 141 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 LAPTM4AQ15012 233 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 TAF11Q15544 211 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 SLC25A35Q3KQZ1 300 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 PGBD2Q6P3X8 592 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 NHLRC1Q6VVB1 395 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 BTLAQ7Z6A9 289 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 TMEM179BQ7Z7N9 219 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 EPHX4Q8IUS5 362 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 KDM8Q8N371 416 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 ZIC4Q8N9L1 334 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 GIPC3Q8TF64 312 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 CENPNQ96H22 339 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 TNFRSF13CQ96RJ3 184 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 S100A14Q9HCY8 104 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 B3GAT1Q9P2W7 334 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 MGAT4BQ9UQ53 548 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 NOSIPQ9Y314 301 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
COL4A6-207ENST00000487645 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 UNC119BA6NIH7 251 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 H3BNX3 289 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 MSTNO14793 375 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 RNF13O43567 381 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 MRPL33O75394 65 aaKnown RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 HPRP00739 348 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 GASTP01350 101 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 BMP5P22003 454 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 IST1P53990 364 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 SIRPAP78324 504 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 IL1RL1Q01638 556 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 RPL18Q07020 188 aaKnown RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 COX10Q12887 443 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 FHL1Q13642 323 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 CD300LDQ6UXZ3 194 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 NUFIP2Q7Z417 695 aaKnown RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 AMIGO2Q86SJ2 522 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 MEX3DQ86XN8 651 aaKnown RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 HIPK1Q86Z02 1210 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 UEVLDQ8IX04 471 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 OR10G2Q8NGC3 310 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 OR51A7Q8NH64 312 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 OR5K1Q8NHB7 308 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 STMN2Q93045 179 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 ZNF775Q96BV0 537 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-207ENST00000487645 FEVQ99581 238 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 GPA33Q99795 319 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 DGCR6LQ9BY27 220 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 SIGLEC7Q9Y286 467 aa11.82□□□□□ -0.52
COL4A6-207ENST00000487645 NPIPB13A6NJU9 1138 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 OR6C65A6NJZ3 312 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 A8MXE2 369 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 NPIPB4C9JG80 1138 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 CLDN14O95500 239 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 CNOT4O95628 575 aaKnown RBP11.81□□□□□ -0.52
COL4A6-207ENST00000487645 HLA-DOBP13765 273 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 ANXA8P13928 327 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 GSTM3P21266 225 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 NTF4P34130 210 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 AQP2P41181 271 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 OR3A2P47893 321 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 HMBOX1Q6NT76 420 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 VWA1Q6PCB0 445 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-207ENST00000487645 AAED1Q7RTV5 226 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 STK32CQ86UX6 486 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 SVOPLQ8N434 492 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 ZNF610Q8N9Z0 462 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 AQP11Q8NBQ7 271 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 OR9Q2Q8NGE9 314 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 OR13C2Q8NGS9 318 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 ZNF385AQ96PM9 386 aaKnown RBP11.81□□□□□ -0.52
COL4A6-207ENST00000487645 KCNJ16Q9NPI9 418 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 INIPQ9NRY2 104 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 PDP1Q9P0J1 537 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-207ENST00000487645 PROCRQ9UNN8 238 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 RCE1Q9Y256 329 aa11.81□□□□□ -0.52
COL4A6-207ENST00000487645 FASNP49327 2511 aaKnown RBP11.8□□□□□ -0.52
COL4A6-207ENST00000487645 COL12A1Q99715 3063 aa11.8□□□□□ -0.52
COL4A6-207ENST00000487645 TRAV27A0A087WT01 109 aa11.8□□□□□ -0.52
COL4A6-207ENST00000487645 A0A1W2PRG6 482 aa11.8□□□□□ -0.52
COL4A6-207ENST00000487645 G3V2T6 193 aa11.8□□□□□ -0.52
COL4A6-207ENST00000487645 TRAF3IP2O43734 574 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-207ENST00000487645 AKAP8O43823 692 aaKnown RBP11.8□□□□□ -0.52
COL4A6-207ENST00000487645 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms