RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-228ENST00000487354 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 WBP2NLQ6ICG8 309 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-228ENST00000487354 CADM2Q8N3J6 435 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 TEX37Q96LM6 180 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 AKTIPQ9H8T0 292 aa13.15□□□□□ -0.3
MCF2L-228ENST00000487354 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-228ENST00000487354 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF99A8MXY4 864 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 TRAF3IP2O43734 574 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 UQCRBP14927 111 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 IL7RP16871 459 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 ADRA2CP18825 462 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 CHI3L1P36222 383 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 MVDP53602 400 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 MRPS11P82912 194 aaKnown RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF440Q8IYI8 595 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 RIBC1Q8N443 379 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 IL17RDQ8NFM7 739 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 MFSD8Q8NHS3 518 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-228ENST00000487354 PPP1R36Q96LQ0 422 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 DPY30Q9C005 99 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
MCF2L-228ENST00000487354 VSTM5A8MXK1 200 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 SLC43A1O75387 559 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 NAT2P11245 290 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 GLRXP35754 106 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 TMEM33P57088 247 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 UBA52P62987 128 aaKnown RBP13.13□□□□□ -0.31
MCF2L-228ENST00000487354 CHI3L2Q15782 390 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 SERPINA11Q86U17 422 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 PNPT1Q8TCS8 783 aaKnown RBP13.13□□□□□ -0.31
MCF2L-228ENST00000487354 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-228ENST00000487354 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 SLC6A13Q9NSD5 602 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 BTNL2Q9UIR0 455 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 FZR1Q9UM11 496 aa13.13□□□□□ -0.31
MCF2L-228ENST00000487354 A0A096LPI6 279 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
MCF2L-228ENST00000487354 PLPP2O43688 288 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ITM2AO43736 263 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 SPAG7O75391 227 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 HPRP00739 348 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 CREB1P16220 341 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF43P17038 809 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 IL12AP29459 219 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 MAGEB1P43366 347 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 RPS5P46782 204 aaKnown RBP13.12□□□□□ -0.31
MCF2L-228ENST00000487354 MYBPC1Q00872 1141 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 DEFA6Q01524 100 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 RNF220Q5VTB9 566 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 NHLRC1Q6VVB1 395 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 CCDC36Q8IYA8 594 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 GPR137CQ8N3F9 429 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 UBLCP1Q8WVY7 318 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-228ENST00000487354 SLC25A36Q96CQ1 311 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 OXGR1Q96P68 337 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 RHOXF2Q9BQY4 288 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 SUCNR1Q9BXA5 334 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF665Q9H7R5 613 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-228ENST00000487354 NOTCH1P46531 2555 aa13.12□□□□□ -0.31
MCF2L-228ENST00000487354 IGKV1D-42A0A075B6H8 117 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 CCDC154A6NI56 674 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 E9PBE3 544 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 M0R082 166 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 AHSA1O95433 338 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 BPGMP07738 259 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 NUDT17P0C025 328 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 HKR1P10072 659 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 ARAFP10398 606 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 NR2F1P10589 423 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 ETV4P43268 484 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 CAPZA2P47755 286 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 GNA13Q14344 377 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 RPS26P11Q5JNZ5 115 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-228ENST00000487354 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 C20orf196Q8IYI0 205 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
MCF2L-228ENST00000487354 RNF217Q8TC41 542 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms