RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLC7A6Q92536 515 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF566Q969W8 418 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 PDXPQ96GD0 296 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 ACER3Q9NUN7 267 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 WDPCPO95876 746 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 MOB3CQ70IA8 216 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 KLHDC8BQ8IXV7 354 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 CMIPQ8IY22 773 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 OR9K2Q8NGE7 335 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 IL1F10Q8WWZ1 152 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 NAT6Q93015 286 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLC35B4Q969S0 331 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 C19orf12Q9NSK7 152 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 NME7Q9Y5B8 376 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 CORINQ9Y5Q5 1042 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 AKAP11Q9UKA4 1901 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 TRAPPC2LH3BP13 241 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 BTG1P62324 171 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 TEKQ02763 1124 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 HTR4Q13639 388 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 OXA1LQ15070 435 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 NR0B2Q15466 257 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SYT14P1Q58G82 188 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 PPP1R3BQ86XI6 285 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 PIGCQ92535 297 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLC25A46Q96AG3 418 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 LCORQ96JN0 433 aaPredicted RBP13.6□□□□□ -0.23
EPHB4-206ENST00000487222 DUSP21Q9H596 190 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 MUTYHQ9UIF7 546 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLC5A10A0PJK1 596 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 CASP6P55212 293 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 GP2P55259 537 aaKnown RBP13.6□□□□□ -0.23
EPHB4-206ENST00000487222 RPS18P62269 152 aaKnown RBP13.6□□□□□ -0.23
EPHB4-206ENST00000487222 RABEPKQ7Z6M1 372 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 PLPP6Q8IY26 295 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 CADM3Q8N126 398 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 WFDC5Q8TCV5 224 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 DNAJB11Q9UBS4 358 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 OTOL1A6NHN0 477 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 BCL6P41182 706 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 PLA2G7Q13093 441 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 TANGO2Q6ICL3 276 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 KIAA0907Q7Z7F0 614 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 RTN4RL1Q86UN2 441 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 OR10K1Q8NGX5 313 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SLC46A1Q96NT5 459 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 LIN7BQ9HAP6 207 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 KNL1Q8NG31 2342 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 GFYI3L273 518 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ITGB8P26012 769 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 GDF1P27539 372 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM176BQ3YBM2 270 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 OTUD1Q5VV17 481 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 CD276Q5ZPR3 534 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SH2D5Q6ZV89 423 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MRPL41Q8IXM3 137 aaKnown RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 FAM26EQ8N5C1 309 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MCOLN1Q9GZU1 580 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 CHST8Q9H2A9 424 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 STEAP1Q9UHE8 339 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ITGB4P16144 1822 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ESPNLQ6ZVH7 1005 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MED25Q71SY5 747 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF511Q8NB15 262 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 CDCA4Q9BXL8 241 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 FAM212BQ9NTI7 297 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 D6RAR5 112 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 RFXAPO00287 272 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 LGI1O95970 557 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 HOXA9P31269 272 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MTCP1P56278 107 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SLC51BQ86UW2 128 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SLC22A24Q8N4F4 322 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SGK3Q96BR1 496 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 SLC25A21Q9BQT8 299 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 ACAD8Q9UKU7 415 aa13.59□□□□□ -0.23
EPHB4-206ENST00000487222 MRPS28Q9Y2Q9 187 aaKnown RBP13.59□□□□□ -0.23
EPHB4-206ENST00000487222 TMED7-TICAM2A0A0A6YYA0 188 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 NSG1A0A0A6YYJ2 146 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 PIP5K1CO60331 668 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 CTNSO60931 367 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 UTS2O95399 124 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 S100A11P31949 105 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 MFGE8Q08431 387 aaPredicted RBP13.58□□□□□ -0.23
EPHB4-206ENST00000487222 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.236e-11■■■■□ 20.3
EPHB4-206ENST00000487222 MSMO1Q15800 293 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms