RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PGBD2Q6P3X8 592 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 OAFQ86UD1 273 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 UEVLDQ8IX04 471 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 GNPDA2Q8TDQ7 276 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 PYDC1Q8WXC3 89 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF775Q96BV0 537 aaPredicted RBP17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 BDH2Q9BUT1 245 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 PROCRQ9UNN8 238 aa17.2■□□□□ 0.34
PCOLCE-208ENST00000487172 UBR5O95071 2799 aaPredicted RBP17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 ARRDC5A6NEK1 342 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 A8MXE2 369 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 PTP4A3O75365 173 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 OR3A2P47893 321 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 GSSP48637 474 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 RPL18Q07020 188 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 FHL1Q13642 323 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 C1DQ13901 141 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 FBXL19-AS1Q494R0 122 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 ANKK1Q8NFD2 765 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF385AQ96PM9 386 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 GPA33Q99795 319 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 KCNJ16Q9NPI9 418 aa17.19■□□□□ 0.34
PCOLCE-208ENST00000487172 H3BNX3 289 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 RNF13O43567 381 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 TRAF3IP2O43734 574 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 ENTPD5O75356 428 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 MRPL33O75394 65 aaKnown RBP17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 AHCYP23526 432 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 FPR3P25089 353 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 AQP2P41181 271 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 PCYT1AP49585 367 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 ASCL1P50553 236 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 ARHGDIAP52565 204 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 IST1P53990 364 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 PRPS1P60891 318 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 TSPAN31Q12999 210 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 LAPTM4AQ15012 233 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 ZBED5Q49AG3 693 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 TMEM179BQ7Z7N9 219 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 MEX3DQ86XN8 651 aaKnown RBP17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 LRRC75AQ8NAA5 344 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 OR9Q2Q8NGE9 314 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 OR13C2Q8NGS9 318 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 OR51A7Q8NH64 312 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 GIPC3Q8TF64 312 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 LRTOMTQ8WZ04 291 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 TNFRSF13CQ96RJ3 184 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 DGCR6LQ9BY27 220 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 UCK2Q9BZX2 261 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 MGAT4BQ9UQ53 548 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 RCE1Q9Y256 329 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 SIGLEC7Q9Y286 467 aa17.18■□□□□ 0.34
PCOLCE-208ENST00000487172 UNC119BA6NIH7 251 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 NPIPB13A6NJU9 1138 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 NPIPB4C9JG80 1138 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 ANKRD65E5RJM6 399 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 C11orf98E9PRG8 122 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 AKAP8O43823 692 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 E2F6O75461 281 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 CNOT4O95628 575 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 GASTP01350 101 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 HLA-DOBP13765 273 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 POU3F1Q03052 451 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 ALG10Q5BKT4 473 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 SHQ1Q6PI26 577 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 TFAP2EQ6VUC0 442 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 AAED1Q7RTV5 226 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 STK32CQ86UX6 486 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF610Q8N9Z0 462 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 OR10G2Q8NGC3 310 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 OR5K1Q8NHB7 308 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 MOSPD2Q8NHP6 518 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 C12orf49Q9H741 205 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 S100A14Q9HCY8 104 aa17.17■□□□□ 0.34
PCOLCE-208ENST00000487172 TRAV27A0A087WT01 109 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 FAM90A27PA6NNH2 459 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF432O94892 652 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 CLDN17P56750 224 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 TAF11Q15544 211 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 HMBOX1Q6NT76 420 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF474Q6S9Z5 364 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 BEND4Q6ZU67 534 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 ZNF100Q8IYN0 542 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 AQP11Q8NBQ7 271 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 APH1AQ96BI3 265 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 CENPNQ96H22 339 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 OPN3Q9H1Y3 402 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 MCCC2Q9HCC0 563 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 INIPQ9NRY2 104 aa17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 PDP1Q9P0J1 537 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 FOXD3Q9UJU5 478 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 KLF2Q9Y5W3 355 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-208ENST00000487172 OR6C65A6NJZ3 312 aa17.15■□□□□ 0.34
PCOLCE-208ENST00000487172 EEF1E1-BLOC1S5C9J1V9 151 aa17.15■□□□□ 0.34
PCOLCE-208ENST00000487172 EEF1E1O43324 174 aaKnown RBP17.15■□□□□ 0.34
PCOLCE-208ENST00000487172 NDUFB2O95178 105 aa17.15■□□□□ 0.34
PCOLCE-208ENST00000487172 ADAP00813 363 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms