RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 LRRC37A5PQ49AS3 106 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 MORN4Q8NDC4 146 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 LGALS14Q8TCE9 139 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 GPR119Q8TDV5 335 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 DUSP23Q9BVJ7 150 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 RANGRFQ9HD47 186 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-216ENST00000486741 HPF1Q9NWY4 346 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 FBXL3Q9UKT7 428 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 F5H5K5 113 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SULT2B1O00204 365 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SIGLEC6O43699 453 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZFAND5O76080 213 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 OR3A3P47888 321 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 OR3A2P47893 321 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 GMFBP60983 142 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 MEP1BQ16820 701 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 DGAT2L6Q6ZPD8 337 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 DNAAF1Q8NEP3 725 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 OR4M1Q8NGD0 313 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SYNPRQ8TBG9 265 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 DDIT4LQ96D03 193 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 CACNA1GO43497 2377 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 DSCR3O14972 297 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SULT1C4O75897 302 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 PIAS2O75928 621 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 FRKP42685 505 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF81P51508 661 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ERGP11308 486 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 PGAM2P15259 253 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 BCKDHBP21953 392 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 MAGEB1P43366 347 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 PPICP45877 212 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 GALEQ14376 348 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 RPL22L1Q6P5R6 122 aaKnown RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 TSEN54Q7Z6J9 526 aaKnown RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 COMTD1Q86VU5 262 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SLC35F3Q8IY50 421 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ITPKCQ96DU7 683 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 PISDQ9UG56 409 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF346Q9UL40 294 aaKnown RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SIGLEC7Q9Y286 467 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 DTX4Q9Y2E6 619 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF281Q9Y2X9 895 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 HEATR5BQ9P2D3 2071 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NKX2-2O95096 273 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 TBX6O95947 436 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SPNP16150 400 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 SPI1P17947 270 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 FUT5Q11128 374 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NKPD1Q17RQ9 610 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 OR14L1PQ8NHC6 308 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 CEP76Q8TAP6 659 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-216ENST00000486741 NUDT9Q9BW91 350 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 INPP5EQ9NRR6 644 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 TMEM74BQ9NUR3 256 aa12.11□□□□□ -0.47
HMGN1-216ENST00000486741 ELK1P19419 428 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 CASP3P42574 277 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 PTH2RP49190 550 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 DCAF7P61962 342 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 PSG6Q00889 435 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 RPL18Q07020 188 aaKnown RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 HBMQ6B0K9 141 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 LRRC28Q86X40 367 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 BRIX1Q8TDN6 353 aaKnown RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 ANKRD9Q96BM1 317 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 ZMAT3Q9HA38 289 aaKnown RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 POLE3Q9NRF9 147 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 NPFFR2Q9Y5X5 522 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 TMEM269A0A1B0GVZ9 245 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 SHISA8B8ZZ34 492 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 CFL1P23528 166 aaKnown RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 PSMA6P60900 246 aaKnown RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 PUDPQ08623 228 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 COL28A1Q2UY09 1125 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 LRRC69Q6ZNQ3 347 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 SPEM1Q8N4L4 309 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF321PQ8N8H1 164 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 TSPAN10Q9H1Z9 355 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 FKBP14Q9NWM8 211 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 RCE1Q9Y256 329 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 CACNG2Q9Y698 323 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 CYR61O00622 381 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms