RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 CMAHPQ9Y471 501 aa12.24□□□□□ -0.45
SDCCAG3-211ENST00000486441 LOC102725191A0A1B0GVB3 256 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 HPRP00739 348 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 HLA-HP01893 362 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 NR2F1P10589 423 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 HOXC5Q00444 222 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 NPRL3Q12980 569 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 FXNQ16595 210 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 SLC9B1Q4ZJI4 515 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF627Q7L945 461 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 SERPINA11Q86U17 422 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 IL17RDQ8NFM7 739 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 TAAR8Q969N4 342 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 SLC25A36Q96CQ1 311 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 PKNOX2Q96KN3 472 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 OXGR1Q96P68 337 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 LRRC37BQ96QE4 947 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 NARFLQ9H6Q4 476 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF275Q9NSD4 429 aaPredicted RBP12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 HAO1Q9UJM8 370 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 PCDHB10Q9UN67 800 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
SDCCAG3-211ENST00000486441 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 VSTM5A8MXK1 200 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF99A8MXY4 864 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 E9PBE3 544 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 MS4A18H0YCH9 400 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ERCC1P07992 297 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 HLA-DOBP13765 273 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 UQCRBP14927 111 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 PCMT1P22061 227 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ACHEP22303 614 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 S100A3P33764 101 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 GLRXP35754 106 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 RPS5P46782 204 aaKnown RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 NME5P56597 212 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 TMEM33P57088 247 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 GNA13Q14344 377 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 MAD2L1BPQ15013 274 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 DPY19L1Q2PZI1 675 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 TUSC1Q2TAM9 212 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 MS4A18Q3C1V0 323 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF621Q6ZSS3 439 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 PEX5LQ8IYB4 626 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZDHHC22Q8N966 263 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 KIF18AQ8NI77 898 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 RDH5Q92781 318 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZMYND19Q96E35 227 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF443Q9Y2A4 671 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-211ENST00000486441 LOC105371242A0A075B767 164 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 A0A096LPI6 279 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 M0R233 179 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 SLC43A1O75387 559 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 DEAF1O75398 565 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 TFP02787 698 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 SAGP10523 405 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 ETFAP13804 333 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF43P17038 809 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 AQP5P55064 265 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 ACTG1P63261 375 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 TXNL4AP83876 142 aaKnown RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 CHI3L2Q15782 390 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 LIN52Q52LA3 116 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 RPS26P11Q5JNZ5 115 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 OGFOD2Q6N063 350 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 NUDCD3Q8IVD9 361 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 CCDC36Q8IYA8 594 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 C20orf196Q8IYI0 205 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 LRRC34Q8IZ02 419 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 ZNF418Q8TF45 676 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 TXNDC15Q96J42 360 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 PANX1Q96RD7 426 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 SYT3Q9BQG1 590 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 USP22Q9UPT9 525 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 GPR45Q9Y5Y3 372 aa12.21□□□□□ -0.45
SDCCAG3-211ENST00000486441 M0R082 166 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 AHSA1O95433 338 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 LBPP18428 481 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 EPHA1P21709 976 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 RPL14P50914 215 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 COPZ1P61923 177 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 PIGFQ07326 219 aa12.2□□□□□ -0.46
SDCCAG3-211ENST00000486441 AWAT1Q58HT5 328 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms