RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FZD7O75084 574 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 UPK3AO75631 287 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 OR6A2O95222 327 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 MT-ATP6P00846 226 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 BGLAPP02818 100 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 UMPSP11172 480 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 AHCYP23526 432 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 CD40P25942 277 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 ROR2Q01974 943 aaKnown RBP11.3□□□□□ -0.6
CHMP3-208ENST00000486404 PUDPQ08623 228 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 VEZF1Q14119 521 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 TBRG1Q3YBR2 411 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 C1QTNF12Q5T7M4 302 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 CARD17Q5XLA6 110 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-208ENST00000486404 CCDC80Q76M96 950 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 CARM1Q86X55 608 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 CALHM3Q86XJ0 350 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 PIK3C3Q8NEB9 887 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 TRMT61AQ96FX7 289 aaKnown RBP11.3□□□□□ -0.6
CHMP3-208ENST00000486404 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 C18orf12Q96KH6 178 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 FAM107BQ9H098 131 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 FKRPQ9H9S5 495 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 B3GAT2Q9NPZ5 323 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 SLC7A7Q9UM01 511 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 AP3M1Q9Y2T2 418 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 SH3GLB1Q9Y371 365 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 TRAF3IP2O43734 574 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 SOD3P08294 240 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 GZMMP51124 257 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 TAS2R41P59536 307 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 SLC25A3Q00325 362 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 AGAP6Q5VW22 663 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 PRSS57Q6UWY2 283 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 SPATA21Q7Z572 469 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 RBM45Q8IUH3 476 aaKnown RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 OR5J2Q8NH18 312 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 LILRB1Q8NHL6 650 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 RP9Q8TA86 221 aaKnown RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 HS6ST2Q96MM7 605 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 MOGAT1Q96PD6 335 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 ZNF317Q96PQ6 595 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 OR2M2Q96R28 347 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 MOV10Q9HCE1 1003 aaKnown RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 DLL4Q9NR61 685 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 ZNF701Q9NV72 531 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
CHMP3-208ENST00000486404 NOX1Q9Y5S8 564 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
CHMP3-208ENST00000486404 A0A096LPE4 126 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 ELOVL7A1L3X0 281 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 LRRN3E7EW58 273 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 C11orf98E9PRG8 122 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 ATP6V1G2-DDX39BF2Z307 99 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 H7C1Q1 480 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 M0R3G1 203 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 GSTA4O15217 222 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 CH25HO95992 272 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 HPRP00739 348 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 INHBBP09529 407 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 DANCRP0C864 163 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 ADORA3P0DMS8 318 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 COX4I1P13073 169 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 PAX1P15863 534 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 TNFRSF1BP20333 461 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 CDKN1AP38936 164 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 CAPZA2P47755 286 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 NUDT2P50583 147 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 CYBRD1Q53TN4 286 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 ANKRD16Q6P6B7 361 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 FBXL14Q8N1E6 418 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 OR6N1Q8NGY5 312 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 LZICQ8WZA0 190 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 SLC41A3Q96GZ6 507 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 TPD52L3Q96J77 140 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 DHRS9Q9BPW9 319 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 POLR2J2Q9GZM3 115 aaKnown RBP11.28□□□□□ -0.6
CHMP3-208ENST00000486404 PCDHAC1Q9H158 963 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
CHMP3-208ENST00000486404 NANSQ9NR45 359 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 USP22Q9UPT9 525 aa11.28□□□□□ -0.6
CHMP3-208ENST00000486404 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TRIM64BA6NI03 449 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms