RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 EPHX4Q8IUS5 362 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 UEVLDQ8IX04 471 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ZIC4Q8N9L1 334 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 OR13C2Q8NGS9 318 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 PYDC1Q8WXC3 89 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 C12orf49Q9H741 205 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 PLSCR4Q9NRQ2 329 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 HELZ2Q9BYK8 2649 aaKnown RBP17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ARRDC5A6NEK1 342 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 EEF1E1-BLOC1S5C9J1V9 151 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 ANKRD65E5RJM6 399 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 BLOC1S5-TXNDC5H3BN57 136 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 EEF1E1O43324 174 aaKnown RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 TRAF3IP2O43734 574 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 SMNDC1O75940 238 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 AHCYP23526 432 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 FPR3P25089 353 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 FASP25445 335 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 ASCL1P50553 236 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 IST1P53990 364 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 POU3F1Q03052 451 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 FHL1Q13642 323 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 C1DQ13901 141 aaKnown RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 PGBD2Q6P3X8 592 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 OAFQ86UD1 273 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 ANKK1Q8NFD2 765 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 OR9Q2Q8NGE9 314 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 ZNF775Q96BV0 537 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 ZNF385AQ96PM9 386 aaKnown RBP17.67■□□□□ 0.42
COL6A2-208ENST00000485591 UCK2Q9BZX2 261 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 NTN4Q9HB63 628 aa17.67■□□□□ 0.42
COL6A2-208ENST00000485591 FLNCQ14315 2725 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 TRAV27A0A087WT01 109 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 C11orf98E9PRG8 122 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 H3BNX3 289 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 RNF13O43567 381 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 ENTPD5O75356 428 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 E2F6O75461 281 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 NTF4P34130 210 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 AQP2P41181 271 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 OR3A2P47893 321 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 LAPTM4AQ15012 233 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 FBXL19-AS1Q494R0 122 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 TFAP2EQ6VUC0 442 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 NHLRC1Q6VVB1 395 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 GNPDA2Q8TDQ7 276 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 GPA33Q99795 319 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 OPN3Q9H1Y3 402 aaPredicted RBP17.66■□□□□ 0.42
COL6A2-208ENST00000485591 KCNJ16Q9NPI9 418 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 PARPBPQ9NWS1 579 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 RCE1Q9Y256 329 aa17.66■□□□□ 0.42
COL6A2-208ENST00000485591 USP9XQ93008 2570 aaPredicted RBP17.66■□□□□ 0.42
COL6A2-208ENST00000485591 NKX2-6A6NCS4 301 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 A8MXE2 369 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 AKAP8O43823 692 aaKnown RBP17.65■□□□□ 0.42
COL6A2-208ENST00000485591 MRPL33O75394 65 aaKnown RBP17.65■□□□□ 0.42
COL6A2-208ENST00000485591 HLA-DOBP13765 273 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 GSSP48637 474 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 CLDN17P56750 224 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 TSPAN31Q12999 210 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 ZBED5Q49AG3 693 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 CASP12Q6UXS9 341 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 AAED1Q7RTV5 226 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 TMEM179BQ7Z7N9 219 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 STK32CQ86UX6 486 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 OR10G2Q8NGC3 310 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 OR51A7Q8NH64 312 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 MOSPD2Q8NHP6 518 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 GIPC3Q8TF64 312 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 LRTOMTQ8WZ04 291 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 APH1AQ96BI3 265 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 TNFRSF13CQ96RJ3 184 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 BDH2Q9BUT1 245 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 MCCC2Q9HCC0 563 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 SIGLEC7Q9Y286 467 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 DOPEY1Q5JWR5 2465 aa17.65■□□□□ 0.42
COL6A2-208ENST00000485591 FREM1Q5H8C1 2179 aa17.64■□□□□ 0.42
COL6A2-208ENST00000485591 TENM4Q6N022 2769 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 UNC119BA6NIH7 251 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 NPIPB13A6NJU9 1138 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 NPIPB4C9JG80 1138 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 PRPS1P60891 318 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 TFF3Q07654 80 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 ALG10Q5BKT4 473 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 SHQ1Q6PI26 577 aaKnown RBP17.64■□□□□ 0.41
COL6A2-208ENST00000485591 LUZP2Q86TE4 346 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 ZNF100Q8IYN0 542 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 ZNF610Q8N9Z0 462 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 LRRC75AQ8NAA5 344 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 AQP11Q8NBQ7 271 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 NRBF2Q96F24 287 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 DGCR6LQ9BY27 220 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 INIPQ9NRY2 104 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 MGAT4BQ9UQ53 548 aa17.64■□□□□ 0.41
COL6A2-208ENST00000485591 KLF2Q9Y5W3 355 aaPredicted RBP17.64■□□□□ 0.41
COL6A2-208ENST00000485591 PTP4A3O75365 173 aa17.63■□□□□ 0.41
COL6A2-208ENST00000485591 SERPINI2O75830 405 aa17.63■□□□□ 0.41
COL6A2-208ENST00000485591 ZNF432O94892 652 aa17.63■□□□□ 0.41
COL6A2-208ENST00000485591 CNOT4O95628 575 aaKnown RBP17.63■□□□□ 0.41
COL6A2-208ENST00000485591 GASTP01350 101 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms