RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 KLF4O43474 513 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 RNF13O43567 381 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 WNT11O96014 354 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 CD3EP07766 207 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 NCK1P16333 377 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 ITGA2P17301 1181 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 SH3BGRP55822 239 aaPredicted RBP11.13□□□□□ -0.63
SDHB-207ENST00000485515 PRPS1P60891 318 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 SLC25A3Q00325 362 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 TRAM2Q15035 370 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 MS4A18Q3C1V0 323 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 C9orf135Q5VTT2 229 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 WDR88Q6ZMY6 472 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 NANOGNBQ7Z5D8 188 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 MUS81Q96NY9 551 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 LINC00470Q9BZP3 86 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 AMBRA1Q9C0C7 1298 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 FAM53CQ9NYF3 392 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
SDHB-207ENST00000485515 SEC14L4Q9UDX3 406 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 AMDHD2Q9Y303 409 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 CREBBPQ92793 2442 aa11.13□□□□□ -0.63
SDHB-207ENST00000485515 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 LRRN3E7EW58 273 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 C11orf98E9PRG8 122 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 SERPINI2O75830 405 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 LYPD3O95274 346 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 IGF2P01344 180 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 THY1P04216 161 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ITGA5P08648 1049 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 FUT1P19526 365 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 UBE2NP61088 152 aaKnown RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 LTBQ06643 244 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ZP4Q12836 540 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 GABRA6Q16445 453 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 PAMR1Q6UXH9 720 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ZNF704Q6ZNC4 412 aaPredicted RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 C20orf204Q6ZNR8 217 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 HDDC2Q7Z4H3 204 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 NKAIN4Q8IVV8 208 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ARHGAP24Q8N264 748 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 OR6N1Q8NGY5 312 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 OR52N5Q8NH56 324 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 TMEM255BQ8WV15 326 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 NRGNQ92686 78 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 PIGTQ969N2 578 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 RADILQ96JH8 1075 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ADAD1Q96M93 576 aaKnown RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 NSMCE2Q96MF7 247 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 PRSS27Q9BQR3 290 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 MOV10Q9HCE1 1003 aaKnown RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 DCAF13Q9NV06 445 aaKnown RBP11.12□□□□□ -0.63
SDHB-207ENST00000485515 B3GAT1Q9P2W7 334 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 A4GNTQ9UNA3 340 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 PLEKHA6Q9Y2H5 1048 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 RNF115Q9Y4L5 304 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 TACC2O95359 2948 aa11.12□□□□□ -0.63
SDHB-207ENST00000485515 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 PDLIM1O00151 329 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 CLOCKO15516 846 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 SIAH2O43255 324 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 STAMBPO95630 424 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 ASAH2BP0C7U1 165 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 PTAFRP25105 342 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 IST1P53990 364 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 ROR2Q01974 943 aaKnown RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 TAF11Q15544 211 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 ACKR1Q16570 336 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 NCMAPQ5T1S8 102 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 ZNF730Q6ZMV8 503 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 SLC35D2Q76EJ3 337 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 TSPYL5Q86VY4 417 aaPredicted RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 RNF113BQ8IZP6 322 aaKnown RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 OFCC1Q8IZS5 231 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 LRR1Q96L50 414 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 OR2M2Q96R28 347 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 NDEL1Q9GZM8 345 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 LIME1Q9H400 295 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
SDHB-207ENST00000485515 MEPEQ9NQ76 525 aaPredicted RBP11.11□□□□□ -0.63
SDHB-207ENST00000485515 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms