RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 H3F3AP84243 136 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 TOP3AQ13472 1001 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 PLEKHN1Q494U1 663 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 TMEM201Q5SNT2 666 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 SLC25A30Q5SVS4 291 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 GPR139Q6DWJ6 353 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 VASNQ6EMK4 673 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 MEIOBQ8N635 442 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 LSM14AQ8ND56 463 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 OR10D3Q8NH80 312 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF566Q969W8 418 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 CRELD1Q96HD1 420 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 LRR1Q96L50 414 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 NAA11Q9BSU3 229 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 YTHDF1Q9BYJ9 559 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 SRXN1Q9BYN0 137 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 TSPAN10Q9H1Z9 355 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 FN3KQ9H479 309 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF71Q9NQZ8 489 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 GRHPRQ9UBQ7 328 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 KLHL21Q9UJP4 597 aa18.32■□□□□ 0.52
VCPKMT-203ENST00000484763 DNAJC13O75165 2243 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 A0A1W2PRG6 482 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 SLC1A7O00341 560 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 TXNDC12O95881 172 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 PLGP00747 810 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 LYNP07948 512 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 EIF1AXP47813 144 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 CLDN15P56746 228 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 OCLNQ16625 522 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 SMN1Q16637 294 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 EMC4Q5J8M3 183 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 MEDAGQ5VYS4 303 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 PXKQ7Z7A4 578 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 SIAH3Q8IW03 269 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 KDM8Q8N371 416 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 PNPLA2Q96AD5 504 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 RASD2Q96D21 266 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 Q96M85 177 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 TIGARQ9NQ88 270 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 BLOC1S6Q9UL45 172 aa18.31■□□□□ 0.52
VCPKMT-203ENST00000484763 SH3D21A4FU49 640 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 MAGEA13PA6NCF6 341 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 CXCL13O43927 109 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 SMNDC1O75940 238 aaKnown RBP eCLIP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 CCDC159P0C7I6 412 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 HIST1H1CP16403 213 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 AGFG1P52594 562 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ACKR1Q16570 336 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 TMEM225Q6GV28 225 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 BPIFB6Q8NFQ5 453 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 CPNE4Q96A23 557 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 TXNIPQ9H3M7 391 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 PRORYQ9H606 182 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 DNAJC27Q9NZQ0 273 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 B3GAT1Q9P2W7 334 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 SPRR3Q9UBC9 169 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 RASD1Q9Y272 281 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 NPIPB13A6NJU9 1138 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF814B7Z6K7 855 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 NPIPB4C9JG80 1138 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ENPP1P22413 925 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 RPS3AP61247 264 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 RPL27P61353 136 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 CSNK2BP67870 215 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 POU3F1Q03052 451 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 NADK2Q4G0N4 442 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 KCTD21Q4G0X4 260 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF362Q5T0B9 420 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 CXXC5Q7LFL8 322 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 GPAT4Q86UL3 456 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 UEVLDQ8IX04 471 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 SDR9C7Q8NEX9 313 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 OR52E2Q8NGJ4 325 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 OR4K13Q8NH42 304 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF696Q9H7X3 374 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 HINT3Q9NQE9 182 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF346Q9UL40 294 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 NOX1Q9Y5S8 564 aa18.3■□□□□ 0.52
VCPKMT-203ENST00000484763 ENTPD6O75354 484 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 VAMP5O95183 116 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 CRYABP02511 175 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 HLA-DOBP13765 273 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 PAICSP22234 425 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 CRHBPP24387 322 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 DAP3P51398 398 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 HSF1Q00613 529 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 SRYQ05066 204 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 KRR1Q13601 381 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 CRMP1Q14194 572 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 JAZF1Q86VZ6 243 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 SLC37A3Q8NCC5 494 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 OXGR1Q96P68 337 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 TIMP4Q99727 224 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 PAQR5Q9NXK6 330 aaPredicted RBP18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 SCN3BQ9NY72 215 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 LUZP4Q9P127 313 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 ATMQ13315 3056 aa18.29■□□□□ 0.52
VCPKMT-203ENST00000484763 IGHV3-15A0A0B4J1V0 119 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms