RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HTR4Q13639 388 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 NNATQ16517 81 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 AVL9Q8NBF6 648 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 MOSPD2Q8NHP6 518 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 DACT3Q96B18 629 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-215ENST00000484252 SLC25A38Q96DW6 304 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 SPRTNQ9H040 489 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-215ENST00000484252 HRASLSQ9HDD0 168 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 NANSQ9NR45 359 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
LIMS2-215ENST00000484252 ZFPL1O95159 310 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 IFNA16P05015 189 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 NAGAP17050 411 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 GABRG2P18507 467 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 NANOS3P60323 173 aaKnown RBP17.96■□□□□ 0.47
LIMS2-215ENST00000484252 CAMK2DQ13557 499 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 ZNF74Q16587 644 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 GXYLT1Q4G148 440 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 ATG4DQ86TL0 474 aaPredicted RBP17.96■□□□□ 0.47
LIMS2-215ENST00000484252 ZNF615Q8N8J6 731 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 OR11H4Q8NGC9 324 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 FCAMRQ8WWV6 532 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 S100A16Q96FQ6 103 aaKnown RBP17.96■□□□□ 0.47
LIMS2-215ENST00000484252 SLC25A18Q9H1K4 315 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 RCE1Q9Y256 329 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 CLDN16Q9Y5I7 305 aa17.96■□□□□ 0.47
LIMS2-215ENST00000484252 ARHGEF17Q96PE2 2063 aaPredicted RBP17.96■□□□□ 0.47
LIMS2-215ENST00000484252 SPTY2D1-AS1A0A0U1RR47 76 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 CDC123O75794 336 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 SLC22A5O76082 557 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ADRB1P08588 477 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 PSMB1P20618 241 aaKnown RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 MNDAP41218 407 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 CDKN2AP42771 156 aaKnown RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 CCR5P51681 352 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 PGDP52209 483 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 HSD17B7P56937 341 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 BTG2P78543 158 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 FCRLAQ7L513 359 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 FAM122BQ7Z309 247 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ZNF433Q8N7K0 673 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 BMPERQ8N8U9 685 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 EXD3Q8N9H8 876 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 LRRC75AQ8NAA5 344 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ZDHHC1Q8WTX9 485 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 RGP1Q92546 391 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 RNF166Q96A37 237 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 Q96M85 177 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 LIN7BQ9HAP6 207 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 EXOSC3Q9NQT5 275 aaKnown RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 DLL4Q9NR61 685 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ETV7Q9Y603 341 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 A0A1B0GVT2 93 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 TXNDC12O95881 172 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 IGHV4-34P06331 123 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 SDHAP31040 664 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 AQP2P41181 271 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 SRSF5Q13243 272 aaKnown RBP17.95■□□□□ 0.46
LIMS2-215ENST00000484252 Q499Y3 187 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ZNF542PQ5EBM4 170 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 EMC4Q5J8M3 183 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 ZNF680Q8NEM1 530 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 OR52I2Q8NH67 350 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 TCTN2Q96GX1 697 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 SORCS2Q96PQ0 1159 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 MNTQ99583 582 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 TCF7L1Q9HCS4 588 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 C12orf4Q9NQ89 552 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 UBQLN4Q9NRR5 601 aa17.95■□□□□ 0.46
LIMS2-215ENST00000484252 IDSB3KWA1 339 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 BLOC1S5-TXNDC5H3BN57 136 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 DNASE1P24855 282 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 EPHA4P54764 986 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 MAT1AQ00266 395 aaKnown RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 BIKQ13323 160 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 ALKBH1Q13686 389 aaKnown RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 SERTAD2Q14140 314 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 FZD2Q14332 565 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 FNDC7Q5VTL7 733 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 METTL11BQ5VVY1 283 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 C10orf53Q8N6V4 93 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 NSMAFQ92636 917 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 NXPE2Q96DL1 559 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 ZNF436Q9C0F3 470 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 NKX2-4Q9H2Z4 354 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 C8orf33Q9H7E9 229 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 A0A1B0GUH1 482 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 ZNF432O94892 652 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 LDOC1O95751 146 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-215ENST00000484252 LBX1P52954 281 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 ERV3-1Q14264 604 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 ALG10Q5BKT4 473 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 OLFML2AQ68BL7 652 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 KIAA0895LQ68EN5 471 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 PWWP2BQ6NUJ5 590 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 MTFR2Q6P444 385 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 FAM122CQ6P4D5 195 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 LRRN1Q6UXK5 716 aa17.94■□□□□ 0.46
LIMS2-215ENST00000484252 NUP54Q7Z3B4 507 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms