RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 SMU1Q2TAY7 513 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 WBP2NLQ6ICG8 309 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 MNS1Q8NEH6 495 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 FGFBP3Q8TAT2 258 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 RNF217Q8TC41 542 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 PNPT1Q8TCS8 783 aaKnown RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 TCP10LQ8TDR4 215 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 TESCQ96BS2 214 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 SLC25A36Q96CQ1 311 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 KTI12Q96EK9 354 aaPredicted RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 CCDC115Q96NT0 180 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 OR2M2Q96R28 347 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 SLC6A7Q99884 636 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 TAPBPLQ9BX59 468 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 C1QTNF5Q9BXJ0 243 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 DPY30Q9C005 99 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 ZNF696Q9H7X3 374 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 OPN4Q9UHM6 478 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 MID2Q9UJV3 735 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 GRIP1Q9Y3R0 1128 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 DSPPQ9NZW4 1301 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 VSTM5A8MXK1 200 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 MS4A18H0YCH9 400 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 M0R233 179 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 PPIHO43447 177 aaKnown RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 PLPP2O43688 288 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 PNPP00491 289 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 HPRP00739 348 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 FSHBP01225 129 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 TFP02787 698 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 DBIP07108 87 aaKnown RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 BPGMP07738 259 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 HLA-DOBP13765 273 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 GLRXP35754 106 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 CHI3L1P36222 383 aaPredicted RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 RPS5P46782 204 aaKnown RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 DEFA6Q01524 100 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 MS4A18Q3C1V0 323 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 SERPINA11Q86U17 422 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 ZNF781Q8N8C0 355 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 OR52P1PQ8NH57 321 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 OR51F2Q8NH61 342 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 UBLCP1Q8WVY7 318 aaPredicted RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBR4-213ENST00000483922 TAAR8Q969N4 342 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 TSPAN32Q96QS1 320 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 RBM4Q9BWF3 364 aaKnown RBP11.02□□□□□ -0.65
UBR4-213ENST00000483922 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 BTNL2Q9UIR0 455 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 RCE1Q9Y256 329 aa11.02□□□□□ -0.65
UBR4-213ENST00000483922 TRAV20A0A0B4J274 112 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ZNF99A8MXY4 864 aaPredicted RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 M0R3G1 203 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 TRAF3IP2O43734 574 aaPredicted RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 ZNF500O60304 480 aaPredicted RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 SLC43A1O75387 559 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 PATE4P0C8F1 98 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ARAFP10398 606 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ZNF43P17038 809 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ETV4P43268 484 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 NME5P56597 212 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 UFM1P61960 85 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 UBA52P62987 128 aaKnown RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 MYBPC1Q00872 1141 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 MAD2L1Q13257 205 aaPredicted RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 ALKBH6Q3KRA9 238 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 AVPI1Q5T686 147 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ZNF627Q7L945 461 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 HOMEZQ8IX15 550 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 STK35Q8TDR2 534 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 C22orf15Q8WYQ4 148 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 DVL3Q92997 716 aaPredicted RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 TXNDC15Q96J42 360 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 EMC6Q9BV81 110 aa11.01□□□□□ -0.65
UBR4-213ENST00000483922 MOV10Q9HCE1 1003 aaKnown RBP11.01□□□□□ -0.65
UBR4-213ENST00000483922 IGKV1D-42A0A075B6H8 117 aa11□□□□□ -0.65
UBR4-213ENST00000483922 TLDC2A0PJX2 215 aa11□□□□□ -0.65
UBR4-213ENST00000483922 CDC14BO60729 498 aa11□□□□□ -0.65
UBR4-213ENST00000483922 MPZL1O95297 269 aa11□□□□□ -0.65
UBR4-213ENST00000483922 CLPTM1O96005 669 aa11□□□□□ -0.65
UBR4-213ENST00000483922 ALDOCP09972 364 aaKnown RBP11□□□□□ -0.65
UBR4-213ENST00000483922 NR2F1P10589 423 aa11□□□□□ -0.65
UBR4-213ENST00000483922 ETFAP13804 333 aa11□□□□□ -0.65
UBR4-213ENST00000483922 S100A3P33764 101 aa11□□□□□ -0.65
UBR4-213ENST00000483922 SERPINB5P36952 375 aa11□□□□□ -0.65
UBR4-213ENST00000483922 CAPZA2P47755 286 aa11□□□□□ -0.65
UBR4-213ENST00000483922 MRPS11P82912 194 aaKnown RBP11□□□□□ -0.65
UBR4-213ENST00000483922 HPCAP84074 193 aa11□□□□□ -0.65
UBR4-213ENST00000483922 MVKQ03426 396 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms