RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C1orf140Q5VVS0 124 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 WBP2NLQ6ICG8 309 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 FAHD2BQ6P2I3 314 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MDP1Q86V88 176 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 VRK2Q86Y07 508 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 PEX5LQ8IYB4 626 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF440Q8IYI8 595 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 GPR137CQ8N3F9 429 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 IL17RDQ8NFM7 739 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 CLDND2Q8NHS1 167 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 TCP10LQ8TDR4 215 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 FAM216AQ8WUB2 273 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SLC25A36Q96CQ1 311 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF837Q96EG3 531 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 FAHD2AQ96GK7 314 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MRPL37Q9BZE1 423 aaKnown RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MS4A5Q9H3V2 200 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 NOX3Q9HBY0 568 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 GPR35Q9HC97 309 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 GRIP1Q9Y3R0 1128 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 NUP214P35658 2090 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MGAM2Q2M2H8 2515 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 CDHR4A6H8M9 788 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 RPL36A-HNRNPH2H7BZ11 118 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 M0R233 179 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 FRS3O43559 492 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ITM2AO43736 263 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SYNGR3O43761 229 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 NPIPB7O75200 414 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SLC43A1O75387 559 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SEC14L2O76054 403 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 AHSA1O95433 338 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 AVPP01185 164 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 HLA-HP01893 362 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 GSNP06396 782 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 BPGMP07738 259 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 GAAP10253 952 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SAGP10523 405 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 PRG2P13727 222 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 CREB1P16220 341 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF43P17038 809 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 NCF2P19878 526 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 EPHA1P21709 976 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ACHEP22303 614 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SERPINB5P36952 375 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ALDH3B1P43353 468 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ANXA11P50995 505 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SEC24CP53992 1094 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 TMEM33P57088 247 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 HILS1P60008 231 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 PSMA6P60900 246 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 PIGFQ07326 219 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 MAPK11Q15759 364 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 CEACAM16Q2WEN9 425 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SLC9B1Q4ZJI4 515 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ATG16L1Q676U5 607 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 C1orf229Q6ZS94 237 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF621Q6ZSS3 439 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 USP43Q70EL4 1123 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 CCDC36Q8IYA8 594 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 CLIP4Q8N3C7 705 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 OR52P1PQ8NH57 321 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 KIF18AQ8NI77 898 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 PNPT1Q8TCS8 783 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 RDH5Q92781 318 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 MRPL24Q96A35 216 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 TESCQ96BS2 214 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 CCDC115Q96NT0 180 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 OXGR1Q96P68 337 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 PANX1Q96RD7 426 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 SYT3Q9BQG1 590 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 RBM4Q9BWF3 364 aaKnown RBP6.35□□□□□ -1.39
CSDE1-206ENST00000483030 RACGAP1Q9H0H5 632 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 BTNL2Q9UIR0 455 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 TMCC3Q9ULS5 477 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF232Q9UNY5 417 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 USP22Q9UPT9 525 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
CSDE1-206ENST00000483030 LOC105371242A0A075B767 164 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 WDR91A4D1P6 747 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 FTCDNL1E5RQL4 147 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 E9PBE3 544 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 M0R3G1 203 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 DYNC1I1O14576 645 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 PPIHO43447 177 aaKnown RBP6.34□□□□□ -1.39
CSDE1-206ENST00000483030 TFP02787 698 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 NUDT17P0C025 328 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 PNMTP11086 282 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 CD79AP11912 226 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF35P13682 527 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 CDKN2CP42773 168 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 RPS5P46782 204 aaKnown RBP6.34□□□□□ -1.39
CSDE1-206ENST00000483030 EVX1P49640 407 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 ARFIP2P53365 341 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 CLNS1AP54105 237 aaKnown RBP6.34□□□□□ -1.39
CSDE1-206ENST00000483030 NME5P56597 212 aa6.34□□□□□ -1.39
CSDE1-206ENST00000483030 LMO4P61968 165 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms