RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 MAGEE2Q8TD90 523 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 SLC41A3Q96GZ6 507 aa13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 ALKBH3Q96Q83 286 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 CCDC134Q9H6E4 229 aa13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 MRPL39Q9NYK5 338 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 MTORP42345 2549 aa13.43□□□□□ -0.26
EXOSC3-205ENST00000482614 MS4A18H0YCH9 400 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 MRASO14807 208 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 SMAD7O15105 426 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 CHP2O43745 196 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 HEXAP06865 529 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 CD247P20963 164 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 TTKP33981 857 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 FABP6P51161 128 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 UBE2NP61088 152 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 ROR2Q01974 943 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 GUCY1A3Q02108 690 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 LTBQ06643 244 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 PMS2P3Q13401 168 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 NPTX1Q15818 432 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 CLEC12BQ2HXU8 276 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 MS4A18Q3C1V0 323 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 ANKRD16Q6P6B7 361 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 LINC00114Q6XXX2 140 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 CALHM3Q86XJ0 350 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 C10orf53Q8N6V4 93 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 PCYOX1LQ8NBM8 494 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 PIK3C3Q8NEB9 887 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 BCL2L2Q92843 193 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 TAMM41Q96BW9 452 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 BARX1Q9HBU1 254 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 ATP23Q9Y6H3 246 aa13.42□□□□□ -0.26
EXOSC3-205ENST00000482614 ARPC4-TTLL3A0A0A6YYG9 625 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 LOC100653049A0A140TA62 436 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 CPSF4LA6NMK7 179 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 TRAF3IP2O43734 574 aaPredicted RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 KRT34O76011 436 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 LY6G6DO95868 133 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 MT-ATP6P00846 226 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 VEZF1Q14119 521 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 RABL3Q5HYI8 236 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 ERICH5Q6P6B1 374 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 TTC33Q6PID6 262 aaPredicted RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 SNX32Q86XE0 403 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 RBM45Q8IUH3 476 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 MUC15Q8N387 334 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 ADAMTS16Q8TE57 1224 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 HS6ST2Q96MM7 605 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 MOGAT1Q96PD6 335 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 GPR35Q9HC97 309 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 MOV10Q9HCE1 1003 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 MED4Q9NPJ6 270 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 NOX1Q9Y5S8 564 aa13.41□□□□□ -0.26
EXOSC3-205ENST00000482614 TRAPPC13A5PLN9 417 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 FXYD1O00168 92 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 SLC22A2O15244 555 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 HPRP00739 348 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 HOXB4P17483 251 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 PTNP21246 168 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 ARF1P84077 181 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 PUDPQ08623 228 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 TNK1Q13470 666 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 KRTAP21-3Q3LHN1 58 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 C3orf36Q3SXR2 165 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 C11orf71Q6IPW1 123 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 B3GLCTQ6Y288 498 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 TMEM123Q8N131 208 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 PROX1Q92786 737 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 LRR1Q96L50 414 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 PCDHAC1Q9H158 963 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 CAPN7Q9Y6W3 813 aa13.4□□□□□ -0.26
EXOSC3-205ENST00000482614 SETD2Q9BYW2 2564 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 A0A096LPE4 126 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 A0A1W2PPZ6 126 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 ZNF726A6NNF4 738 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 PLPP3O14495 311 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 OR6A2O95222 327 aa13.39□□□□□ -0.27
EXOSC3-205ENST00000482614 LYPD3O95274 346 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms