RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CDH11P55287 796 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CTBP2P56545 445 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 VSX2P58304 361 aaPredicted RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 HNRNPKP61978 463 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNX13-208ENST00000482558 CD83Q01151 205 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 STX4Q12846 297 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 TRA2AQ13595 282 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNX13-208ENST00000482558 IL11RAQ14626 422 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 LTB4RQ15722 352 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 PRTGQ2VWP7 1150 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 PGGHGQ32M88 737 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 ACSM5Q6NUN0 579 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 HSDL2Q6YN16 418 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CXXC5Q7LFL8 322 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 NRMQ8IXM6 262 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 OR4N4Q8N0Y3 316 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 SLC22A18ASQ8N1D0 253 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CLIP4Q8N3C7 705 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 KLHL36Q8N4N3 616 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 OR7G1Q8NGA0 311 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 OR52I1Q8NGK6 324 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 MBD3L2Q8NHZ7 208 aaPredicted RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 TMEM239Q8WW34 195 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 RPL3LQ92901 407 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 RNFT2Q96EX2 444 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 KLHL15Q96M94 604 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 KCTD7Q96MP8 289 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 ZNF285Q96NJ3 590 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 OR5M11Q96RB7 305 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 ZPBPQ9BS86 351 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 GPR174Q9BXC1 333 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 RSPO3Q9BXY4 272 aaPredicted RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 NDEL1Q9GZM8 345 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 C6orf62Q9GZU0 229 aaPredicted RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 HHATLQ9HCP6 504 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 Q9N2J8 555 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 ADAP2Q9NPF8 381 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CNIH4Q9P003 139 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 ZMAT5Q9UDW3 170 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 MRTO4Q9UKD2 239 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 RCE1Q9Y256 329 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CA5BQ9Y2D0 317 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 MED31Q9Y3C7 131 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 FUOMA2VDF0 154 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 TLCD2A6NGC4 264 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 MBD3L5A6NJ08 208 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 A6NL46 340 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 CHP2O43745 196 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 FGF17O60258 216 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 TPST2O60704 377 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 ONECUT2O95948 504 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 IFNGP01579 166 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 PROS1P07225 676 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 CHRNB1P11230 501 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 CD38P28907 300 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 MC5RP33032 325 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 GABRA3P34903 492 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 CRYBB2P43320 205 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SLC9A3P48764 834 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 GPR143P51810 404 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 ZNF136P52737 540 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 GBX2P52951 348 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 SNU13P55769 128 aaKnown RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 TAS2R43P59537 309 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SHC2P98077 582 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 ZNF155Q12901 538 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 GRM7Q14831 915 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 OR1Q1Q15612 314 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 ZNF141Q15928 474 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SSX1Q16384 188 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 AMZ1Q400G9 498 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 TRMT12Q53H54 448 aaKnown RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 MRPL2Q5T653 305 aaKnown RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 AGAP7PQ5VUJ5 663 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 AADACL4Q5VUY2 407 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 RTL4Q6ZR62 310 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 COMTD1Q86VU5 262 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 PHC2Q8IXK0 858 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 GPALPP1Q8IXQ4 340 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 LNX2Q8N448 690 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 NLGN4YQ8NFZ3 816 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 OR56B2PQ8NGI1 322 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 DNAJA4Q8WW22 397 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 RIT1Q92963 219 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 KIAA1143Q96AT1 154 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 ANKRD9Q96BM1 317 aaPredicted RBP7.03□□□□□ -1.28
SNX13-208ENST00000482558 FCRL4Q96PJ5 515 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 WFDC6Q9BQY6 131 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SLC30A2Q9BRI3 323 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SLC19A3Q9BZV2 496 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 KCNN2Q9H2S1 579 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 ASB6Q9NWX5 421 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 RPS6KB2Q9UBS0 482 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SLC7A7Q9UM01 511 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 SLC35A3Q9Y2D2 325 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms