RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OR2D3Q8NGH3 330 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 OR10V1Q8NGI7 309 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 OR13J1Q8NGT2 312 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 OR2Y1Q8NGV0 311 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SPATA22Q8NHS9 363 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 MAGEE2Q8TD90 523 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 MYLPFQ96A32 169 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 PPWD1Q96BP3 646 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 FLYWCH2Q96CP2 140 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 YIPF6Q96EC8 236 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 URB1-AS1Q96HZ7 61 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 JSRP1Q96MG2 331 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 SEC22CQ9BRL7 303 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 COPS4Q9BT78 406 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SPRY4Q9C004 299 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 PCBD2Q9H0N5 130 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 POPDC2Q9HBU9 364 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RETNQ9HD89 108 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 STARD5Q9NSY2 213 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GPATCH2LQ9NWQ4 482 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 FZR1Q9UM11 496 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GUCA1BQ9UMX6 200 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RNF6Q9Y252 685 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SLC22A7Q9Y694 548 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 ZNF521Q96K83 1311 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 STK36Q9NRP7 1315 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 CACNA1FO60840 1977 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 NSG1A0A0A6YYJ2 146 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 EFCAB10A6NFE3 127 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SLC22A20A6NK97 555 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 CENPXA8MT69 81 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 PROB1E7EW31 1015 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 F5H5T6 163 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 J3QLI3 93 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SH2D1BO14796 132 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 WNT9BO14905 357 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SIGLEC5O15389 551 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 NUPL2O15504 423 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 TAPBPO15533 448 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SPRY3O43610 288 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MED6O75586 246 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 HLA-HP01893 362 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MMP1P03956 469 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 UMODP07911 640 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ACP2P11117 423 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MYOGP15173 224 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MGMTP16455 207 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ELK4P28324 431 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 PRDX3P30048 256 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 NSG1P42857 185 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 XGP55808 180 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 CLDN12P56749 244 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 CLDN20P56880 219 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 RPS4XP62701 263 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 RBX1P62877 108 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 FLI1Q01543 452 aaPredicted RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 PAX2Q02962 417 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 PDIA2Q13087 525 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 ITGA9Q13797 1035 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 DUOXA1Q1HG43 343 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ODF4Q2M2E3 257 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ZNF284Q2VY69 593 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 BSXQ3C1V8 233 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SLC22A6Q4U2R8 563 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 FGD3Q5JSP0 725 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 TEX30Q5JUR7 227 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 PDSS1Q5T2R2 415 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 FAHD1Q6P587 224 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 BHLHB9Q6PI77 547 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 LINGO4Q6UY18 593 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 RBMS3Q6XE24 437 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 TMEM64Q6YI46 380 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 CCNI2Q6ZMN8 369 aaPredicted RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS41-212ENST00000482217 Q6ZSV7 163 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 Q6ZTK2 550 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 TSEN54Q7Z6J9 526 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 MYPOPQ86VE0 399 aaPredicted RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 NRMQ8IXM6 262 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 LINC01561Q8N1V8 128 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 STK40Q8N2I9 435 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MREGQ8N565 214 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 KLHDC1Q8N7A1 406 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 LRRC52Q8N7C0 313 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 LRTM2Q8N967 370 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 OR2AK2Q8NG84 335 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 OR11H4Q8NGC9 324 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 OR11L1Q8NGX0 322 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 OR6N2Q8NGY6 317 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ARRDC2Q8TBH0 407 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SETD7Q8WTS6 366 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 RND1Q92730 232 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 S100PBPQ96BU1 408 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 XPO6Q96QU8 1125 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 IL12RB2Q99665 862 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 NIPSNAP1Q9BPW8 284 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 HCAR1Q9BXC0 346 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 IFT46Q9NQC8 304 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms