RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 DCDC2Q9UHG0 476 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 GPR160Q9UJ42 338 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 ARHGAP32A7KAX9 2087 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 IGHV1-69-2A0A0G2JMI3 117 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 CFAP73A6NFT4 308 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF99A8MXY4 864 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 OMGP23515 440 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 LSP1P33241 339 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 PCGF2P35227 344 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 CRYBB2P43320 205 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 SRSF4Q08170 494 aaKnown RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 FUT5Q11128 374 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 EPS8Q12929 822 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 GSTA3Q16772 222 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 GPAT3Q53EU6 434 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 C8orf74Q6P047 294 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 TNFAIP8L2Q6P589 184 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 SPATC1Q76KD6 591 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 BCL6BQ8N143 479 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 KRTCAP2Q8N6L1 136 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 RAB1CQ92928 201 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 UBE2FQ969M7 185 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 PPP3R2Q96LZ3 170 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF48Q96MX3 618 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 HINT3Q9NQE9 182 aaKnown RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 TAAR3PQ9P1P4 343 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 GIMAP2Q9UG22 337 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 TESQ9UGI8 421 aaKnown RBP12.73□□□□□ -0.37
HDAC6-224ENST00000481929 DNAJC15Q9Y5T4 150 aa12.73□□□□□ -0.37
HDAC6-224ENST00000481929 PPIAL4EA0A075B759 164 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PPIAL4CA0A0B4J2A2 164 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 A8MVM7 634 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PPIAL4DF5H284 164 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 TIMM23O14925 209 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 TPD52L2O43399 206 aaKnown RBP12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PPIAL4FP0DN26 164 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF43P17038 809 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PRPS1L1P21108 318 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 GCAP28676 217 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 SELENOVP59797 346 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PIGFQ07326 219 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 BNIP2Q12982 314 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 BRICD5Q6PL45 260 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF771Q7L3S4 317 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-224ENST00000481929 C1QL4Q86Z23 238 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 ST7LQ8TDW4 575 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
HDAC6-224ENST00000481929 PEX11AO75192 247 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 GLRA3O75311 464 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 RAB36O95755 333 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 PROCP04070 461 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 PTDSS1P48651 473 aaKnown RBP12.71□□□□□ -0.37
HDAC6-224ENST00000481929 GNA13Q14344 377 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 HFEQ30201 348 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 PGS1Q32NB8 556 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 RGS7BPQ6MZT1 257 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-224ENST00000481929 USP51Q70EK9 711 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 HOMEZQ8IX15 550 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 CLECL1Q8IZS7 167 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 KDM8Q8N371 416 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 GLB1L3Q8NCI6 653 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-224ENST00000481929 DEFB108BQ8NET1 73 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF75AQ96N20 296 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 FMO2Q99518 471 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 MS4A7Q9GZW8 240 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-224ENST00000481929 KCNF1Q9H3M0 494 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 BEX1Q9HBH7 125 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 NKIRAS2Q9NYR9 191 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 AUP1Q9Y679 476 aa12.71□□□□□ -0.37
HDAC6-224ENST00000481929 ISPDA4D126 451 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 TRAF3IP2O43734 574 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 FOXH1O75593 365 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 AHSA1O95433 338 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 TFPTP0C1Z6 253 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 PNMTP11086 282 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 GTF2E2P29084 291 aaKnown RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 MTNR1AP48039 350 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 C1DQ13901 141 aaKnown RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 CCDC153Q494R4 210 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 IL23RQ5VWK5 629 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 C16orf87Q6PH81 154 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF813Q6ZN06 617 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 RIMKLAQ8IXN7 391 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF440Q8IYI8 595 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms