RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ARHGDIAP52565 204 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 GFRA1P56159 465 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 TMEM44Q2T9K0 475 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.45□□□□□ -0.74
HPS4-212ENST00000481910 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 KRTCAP3Q53RY4 240 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 PRR30Q53SZ7 412 aaPredicted RBP10.45□□□□□ -0.74
HPS4-212ENST00000481910 ATG4DQ86TL0 474 aaPredicted RBP10.45□□□□□ -0.74
HPS4-212ENST00000481910 SATL1Q86VE3 508 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 KLHL36Q8N4N3 616 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 ATP6V1C2Q8NEY4 427 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 CHAC2Q8WUX2 184 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 SLC38A4Q969I6 547 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 NUDT16L1Q9BRJ7 211 aaKnown RBP10.45□□□□□ -0.74
HPS4-212ENST00000481910 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 NKIRAS2Q9NYR9 191 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 CHRNA9Q9UGM1 479 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 RSL24D1Q9UHA3 163 aaKnown RBP10.45□□□□□ -0.74
HPS4-212ENST00000481910 TMED7Q9Y3B3 224 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 TESMINQ9Y4I5 508 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 LIPGQ9Y5X9 500 aa10.45□□□□□ -0.74
HPS4-212ENST00000481910 ITPR1Q14643 2758 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 SPTA1P02549 2419 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 HMX3A6NHT5 357 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 HSBP1L1C9JCN9 74 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 GNGT2O14610 69 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 EFNA2O43921 213 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 SUSD5O60279 629 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 HCN1O60741 890 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 PRSS23O95084 383 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 IGHG3P01860 377 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 OPN1LWP04000 364 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 H1F0P07305 194 aaKnown RBP10.44□□□□□ -0.74
HPS4-212ENST00000481910 THRBP10828 461 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 PEPDP12955 493 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 IL11P20809 199 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 CHMP24386 653 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 MLLT10P55197 1068 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 DLX5P56178 289 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 CARD18P57730 90 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 SPIBQ01892 262 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 TEX30Q5JUR7 227 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 ZNF324BQ6AW86 544 aaPredicted RBP10.44□□□□□ -0.74
HPS4-212ENST00000481910 OR2T5Q6IEZ7 315 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 ZFP1Q6P2D0 407 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 TRILQ7L0X0 811 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 OFCC1Q8IZS5 231 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 LILRA2Q8N149 483 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 OR2T29Q8NH02 315 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 OR52J3Q8NH60 311 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 PHF21AQ96BD5 680 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 TMEM185BQ9H7F4 350 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 POU2F3Q9UKI9 436 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 GAB2Q9UQC2 676 aa10.44□□□□□ -0.74
HPS4-212ENST00000481910 BOD1L1Q8NFC6 3051 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 A0A087WUJ7 227 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 ADAMDEC1O15204 470 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 OR7A10O76100 309 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 GADD45GO95257 159 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 BMP7P18075 431 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 ELK4P28324 431 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 MAP2K6P52564 334 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 SMIM11AP58511 58 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 SELENBP1Q13228 472 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 MED21Q13503 144 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TRAM2Q15035 370 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 C3orf33Q6P1S2 294 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 CLEC2AQ6UVW9 174 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 LSRQ86X29 649 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 ICA1LQ8NDH6 482 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 CAPSLQ8WWF8 208 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TRUB1Q8WWH5 349 aaKnown RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 SMPDL3BQ92485 455 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 GPR137Q96N19 417 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 SPIN1Q9Y657 262 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 MPDZO75970 2070 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 A0A1B0GTH9 108 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TMEM72A0PK05 275 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 KRT36O76013 467 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 LYPD3O95274 346 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 ACTL6AO96019 429 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TFPIP10646 304 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 POU3F2P20265 443 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 PTNP21246 168 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 HSF1Q00613 529 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 DGCR6Q14129 220 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TMEM176BQ3YBM2 270 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 FGD3Q5JSP0 725 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 THEM4Q5T1C6 240 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 VASNQ6EMK4 673 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 TTC33Q6PID6 262 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 LINC00114Q6XXX2 140 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 WDR88Q6ZMY6 472 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 ZNF605Q86T29 641 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 GHDCQ8N2G8 530 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 CPT1CQ8TCG5 803 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms