RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 WBP2NLQ6ICG8 309 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 NIPAL3Q6P499 406 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 PODNL1Q6PEZ8 512 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 SERPINA11Q86U17 422 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 ZNF440Q8IYI8 595 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 KDM8Q8N371 416 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 C17orf78Q8N4C9 275 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 ARIH2OSQ8N7S6 290 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 C1orf162Q8NEQ5 155 aaPredicted RBP7.84□□□□□ -1.15
HLA-B-253ENST00000481849 OR9I1Q8NGQ6 314 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 OR1K1Q8NGR3 316 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 C10orf105Q8TEF2 133 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 SLC38A5Q8WUX1 472 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 VPS33AQ96AX1 596 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 TMEM45BQ96B21 275 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 TMEM19Q96HH6 336 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.15
HLA-B-253ENST00000481849 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
HLA-B-253ENST00000481849 KCNS3Q9BQ31 491 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 SF3B5Q9BWJ5 86 aaKnown RBP7.84□□□□□ -1.15
HLA-B-253ENST00000481849 AMBRA1Q9C0C7 1298 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 TPT1P8Q9HAU6 139 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 CACYBPQ9HB71 228 aaKnown RBP7.84□□□□□ -1.15
HLA-B-253ENST00000481849 THAP1Q9NVV9 213 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 TMEM45AQ9NWC5 275 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 PMF1-BGLAPU3KQ54 211 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 USF3Q68DE3 2245 aa7.84□□□□□ -1.15
HLA-B-253ENST00000481849 DSPPQ9NZW4 1301 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 ZNF503-AS2A6NEH8 195 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 ZNF587BE7ETH6 402 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SNNO75324 88 aaPredicted RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 UPK3AO75631 287 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 IL6P05231 212 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 IDO1P14902 403 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SLC25A16P16260 332 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 RPS5P46782 204 aaKnown RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 MAP2K6P52564 334 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 UBE2NP61088 152 aaKnown RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 IL1RL1Q01638 556 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 LOXL1Q08397 574 aaPredicted RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 LRRC74AQ0VAA2 488 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 LARS2Q15031 903 aaKnown RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 MST1LQ2TV78 715 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 TNFAIP8L3Q5GJ75 292 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 ZNF311Q5JNZ3 666 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 CYB5R2Q6BCY4 276 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SLC2A7Q6PXP3 512 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 IL17RELQ6ZVW7 336 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 CREB3L2Q70SY1 520 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 LINGO2Q7L985 606 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SLC46A3Q7Z3Q1 461 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 MAVSQ7Z434 540 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 EPHX4Q8IUS5 362 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 POMGNT2Q8NAT1 580 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 GLB1L3Q8NCI6 653 aaPredicted RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 BHLHE22Q8NFJ8 381 aaPredicted RBP7.83□□□□□ -1.16
HLA-B-253ENST00000481849 MAL2Q969L2 176 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 ITCHQ96J02 903 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SORCS2Q96PQ0 1159 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SLC38A2Q96QD8 506 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 OR52B2Q96RD2 323 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 BEX2Q9BXY8 128 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 RMND5AQ9H871 391 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 CHODLQ9H9P2 273 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SEC61A2Q9H9S3 476 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 CALML5Q9NZT1 146 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 SEC14L4Q9UDX3 406 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 CHST2Q9Y4C5 530 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 HYDINQ4G0P3 5121 aa7.83□□□□□ -1.16
HLA-B-253ENST00000481849 ARID1AO14497 2285 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 A0A0G2JPF8 293 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 TMEM247A6NEH6 219 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 HNRNPCL2B2RXH8 293 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 HNRNPCL3B7ZW38 293 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 UBDO15205 165 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 PHF1O43189 567 aaPredicted RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 HNRNPCL1O60812 293 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 AHSA1O95433 338 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 HNRNPCL4P0DMR1 293 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 PNMTP11086 282 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 USF1P22415 310 aaPredicted RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 CBLP22681 906 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 GTF2E2P29084 291 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 SERPINF1P36955 418 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 P2RY4P51582 365 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 POLR2JP52435 117 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 CLDN17P56750 224 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 MAGOHP61326 146 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 SNRPD2P62316 118 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 VLDLRP98155 873 aa7.82□□□□□ -1.16
HLA-B-253ENST00000481849 SRSF2Q01130 221 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 ROR2Q01974 943 aaKnown RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 PDLIM3Q53GG5 364 aaPredicted RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 ABHD12BQ7Z5M8 362 aaPredicted RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 BCL2L2Q92843 193 aaPredicted RBP7.82□□□□□ -1.16
HLA-B-253ENST00000481849 KTI12Q96EK9 354 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms