RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 KDM8Q8N371 416 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 OR4K5Q8NGD3 323 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 OR52J3Q8NH60 311 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 ZNF385AQ96PM9 386 aaKnown RBP17.49■□□□□ 0.39
LIME1-205ENST00000480139 ENKD1Q9H0I2 346 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 CCM2LQ9NUG4 571 aaPredicted RBP17.49■□□□□ 0.39
LIME1-205ENST00000480139 TAS2R5Q9NYW4 299 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 LYVE1Q9Y5Y7 322 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 C19orf84I3L1E1 186 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 TRAF3IP2O43734 574 aaPredicted RBP17.48■□□□□ 0.39
LIME1-205ENST00000480139 ADORA3P0DMS8 318 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 MAKP20794 623 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 UQCRC1P31930 480 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 CD79BP40259 229 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 RPS4XP62701 263 aaKnown RBP17.48■□□□□ 0.39
LIME1-205ENST00000480139 C1DQ13901 141 aaKnown RBP17.48■□□□□ 0.39
LIME1-205ENST00000480139 NHLRC1Q6VVB1 395 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 Q6ZT83 130 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 KIF18BQ86Y91 864 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 GABRG1Q8N1C3 465 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 ANKK1Q8NFD2 765 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 DUS3LQ96G46 650 aaKnown RBP17.48■□□□□ 0.39
LIME1-205ENST00000480139 RSRC1Q96IZ7 334 aaKnown RBP17.48■□□□□ 0.39
LIME1-205ENST00000480139 ALPK1Q96QP1 1244 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 SPOCK3Q9BQ16 436 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 MALT1Q9UDY8 824 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 TMCC3Q9ULS5 477 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 HIF3AQ9Y2N7 669 aa17.48■□□□□ 0.39
LIME1-205ENST00000480139 OR6C65A6NJZ3 312 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 EFCAB9A8MZ26 197 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 AKAP8O43823 692 aaKnown RBP17.47■□□□□ 0.39
LIME1-205ENST00000480139 SAGP10523 405 aaPredicted RBP17.47■□□□□ 0.39
LIME1-205ENST00000480139 OMPP47874 163 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 POU3F1Q03052 451 aaPredicted RBP17.47■□□□□ 0.39
LIME1-205ENST00000480139 CASP12Q6UXS9 341 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 AAED1Q7RTV5 226 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 LINC00471Q8N535 108 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 OR4C15Q8NGM1 316 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 SLCO4A1Q96BD0 722 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 FREM1Q5H8C1 2179 aa17.47■□□□□ 0.39
LIME1-205ENST00000480139 NPIPB13A6NJU9 1138 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 NPIPB4C9JG80 1138 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 BLOC1S5-TXNDC5H3BN57 136 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 TNFRSF11BO00300 401 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 FKBP6O75344 327 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 ZNF432O94892 652 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 POU2F1P14859 743 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 AHCYP23526 432 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 EDNRAP25101 427 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 IFNGR2P38484 337 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 GPR4P46093 362 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 CLDN17P56750 224 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 IL1RL1Q01638 556 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 RPL18Q07020 188 aaKnown RBP17.46■□□□□ 0.39
LIME1-205ENST00000480139 CCNIQ14094 377 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 P2RY6Q15077 328 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 EXOC3L2Q2M3D2 409 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 FBXW9Q5XUX1 488 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 OAFQ86UD1 273 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 REEP1Q9H902 201 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 SLC24A3Q9HC58 644 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 PRSS50Q9UI38 385 aa17.46■□□□□ 0.39
LIME1-205ENST00000480139 KLF4O43474 513 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 RNF13O43567 381 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 CST1P01037 141 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 HLA-DOBP13765 273 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 FHL1Q13642 323 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 SP5Q6BEB4 398 aaPredicted RBP17.45■□□□□ 0.38
LIME1-205ENST00000480139 DMRTC2Q8IXT2 367 aaPredicted RBP17.45■□□□□ 0.38
LIME1-205ENST00000480139 POMGNT2Q8NAT1 580 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 FAM46AQ96IP4 442 aaKnown RBP17.45■□□□□ 0.38
LIME1-205ENST00000480139 RAB3IPQ96QF0 476 aaPredicted RBP17.45■□□□□ 0.38
LIME1-205ENST00000480139 OR10A4Q9H209 315 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 SLCO5A1Q9H2Y9 848 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 ARMC1Q9NVT9 282 aa17.45■□□□□ 0.38
LIME1-205ENST00000480139 C11orf98E9PRG8 122 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 CDC42EP2O14613 210 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 OR10H3O60404 316 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 PSMB1P20618 241 aaKnown RBP17.44■□□□□ 0.38
LIME1-205ENST00000480139 COX5AP20674 150 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 FPR3P25089 353 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 UGT2B10P36537 528 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 AQP2P41181 271 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 SELENOPP49908 381 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 PRPS1P60891 318 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 ACTR3P61158 418 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 FAM27E3Q08E93 113 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 C1orf94Q6P1W5 598 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 NIPAL3Q6P499 406 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 STAC2Q6ZMT1 411 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 ZER1Q7Z7L7 766 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 TMEM123Q8N131 208 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 OR13C2Q8NGS9 318 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 ADAD1Q96M93 576 aaKnown RBP17.44■□□□□ 0.38
LIME1-205ENST00000480139 OR2M2Q96R28 347 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 HDHD5Q9BXW7 423 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 LINC00470Q9BZP3 86 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 VNN3Q9NY84 501 aa17.44■□□□□ 0.38
LIME1-205ENST00000480139 GPR52Q9Y2T5 361 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms