RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OR10A4Q9H209 315 aa9.85□□□□□ -0.83
VPS52-217ENST00000478934 A0A1W2PPC4 97 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 CIB4A0PJX0 185 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 RAD1O60671 282 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 TRIM3O75382 744 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 UCHL1P09936 223 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 TMIGD3P0DMS9 266 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 CTXN1P60606 82 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 IGLV3-21P80748 117 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 HSD17B12Q53GQ0 312 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ELMOD2Q8IZ81 293 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 SMRP1Q8NCR6 262 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 SLC2A12Q8TD20 617 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 ULBP3Q9BZM4 244 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 NMNAT2Q9BZQ4 307 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 WDR76Q9H967 626 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ZNF337Q9Y3M9 751 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 THADAQ6YHU6 1953 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ZNF593O00488 134 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 NOS1APO75052 506 aaPredicted RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 UBL3O95164 117 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 NSA2O95478 260 aaKnown RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 HRGP04196 525 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 H2AFB2P0C5Z0 115 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 HPGDP15428 266 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 CAPZBP47756 277 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 VEGFCP49767 419 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ZNF81P51508 661 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ZP1P60852 638 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 BTG1P62324 171 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 POU4F2Q12837 409 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 GRM7Q14831 915 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 LRRC69Q6ZNQ3 347 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 SHISA6Q6ZSJ9 500 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 Q6ZTK2 550 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 CREB3L2Q70SY1 520 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 OR51A4Q8NGJ6 313 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 OR2T4Q8NH00 348 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 OR52I2Q8NH67 350 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 FAM174AQ8TBP5 190 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 C17orf50Q8WW18 174 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 LPAR4Q99677 370 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 EIF3KQ9UBQ5 218 aaKnown RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 GMEB2Q9UKD1 530 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 ING4Q9UNL4 249 aa9.84□□□□□ -0.83
VPS52-217ENST00000478934 MRPS33Q9Y291 106 aaKnown RBP9.84□□□□□ -0.83
VPS52-217ENST00000478934 FREM2Q5SZK8 3169 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TRAV1-2A0A0B4J238 106 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 EFCAB7A8K855 629 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 LEUTXA8MZ59 168 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 H0YC42 278 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 GPR171O14626 319 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 PLGP00747 810 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 ANXA3P12429 323 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 CD53P19397 219 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 PER3P56645 1201 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 RPS4XP62701 263 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 RPL6Q02878 288 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 ZP2Q05996 745 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SKP2Q13309 424 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 GGTLC2Q14390 218 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TRAM1Q15629 374 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ZNF74Q16587 644 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 VWA2Q5GFL6 755 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 RPL22L1Q6P5R6 122 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 ATG4DQ86TL0 474 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 HAVCR2Q8TDQ0 301 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ATOH1Q92858 354 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 PMM1Q92871 262 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TAAR8Q969N4 342 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 PPP1R14AQ96A00 147 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 AMELYQ99218 206 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SEC22CQ9BRL7 303 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 C8orf33Q9H7E9 229 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 METTL17Q9H7H0 456 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 LIN7BQ9HAP6 207 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 NANSQ9NR45 359 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 GPR27Q9NS67 375 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 STMN3Q9NZ72 180 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 MRM2Q9UI43 246 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 PCDHGA9Q9Y5G4 932 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 NPFFR2Q9Y5X5 522 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 CABIN1Q9Y6J0 2220 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 C7orf66A4D0T2 115 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 C11orf98E9PRG8 122 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SRPX2O60687 465 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 ICOSLGO75144 302 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 UTS2O95399 124 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TACR3P29371 465 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 MMP15P51511 669 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SLC37A1P57057 533 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ACTA2P62736 377 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ACTG2P63267 376 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms