RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 MMEL1Q495T6 779 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 SHEQ5VZ18 495 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 OR7E24Q6IFN5 339 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 MYPOPQ86VE0 399 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-212ENST00000478616 CARM1Q86X55 608 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 C17orf78Q8N4C9 275 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 LRRC17Q8N6Y2 441 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 RP9Q8TA86 221 aaKnown RBP16.4■□□□□ 0.22
SREBF1-212ENST00000478616 ECSITQ9BQ95 431 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 SEC61A2Q9H9S3 476 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 NGBQ9NPG2 151 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 MRPL39Q9NYK5 338 aaKnown RBP16.4■□□□□ 0.22
SREBF1-212ENST00000478616 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 RCE1Q9Y256 329 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 FN1P02751 2386 aaKnown RBP16.4■□□□□ 0.22
SREBF1-212ENST00000478616 CSPG4Q6UVK1 2322 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 NDUFS7O75251 213 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TUBA1BP68363 451 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TUBA4AP68366 448 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 ZNF74Q16587 644 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TBRG1Q3YBR2 411 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 INTS11Q5TA45 600 aaKnown RBP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 PRSS57Q6UWY2 283 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TUBA1AQ71U36 451 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 YTHDF3Q7Z739 585 aaKnown RBP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 DTX2Q86UW9 622 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 NKAIN4Q8IVV8 208 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 SCAIQ8N9R8 606 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 SMAP2Q8WU79 429 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 FBXW5Q969U6 566 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 SH3GL1Q99961 368 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TRAF4Q9BUZ4 470 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 EMC6Q9BV81 110 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 MRGBPQ9NV56 204 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 MED29Q9NX70 200 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 TAS2R5Q9NYW4 299 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 CISD1Q9NZ45 108 aaKnown RBP16.39■□□□□ 0.21
SREBF1-212ENST00000478616 SLC13A4Q9UKG4 626 aa16.39■□□□□ 0.21
SREBF1-212ENST00000478616 CHD3Q12873 2000 aaKnown RBP16.38■□□□□ 0.21
SREBF1-212ENST00000478616 TRAPPC13A5PLN9 417 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 TRIM64A6NGJ6 449 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 TRIM64BA6NI03 449 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 ZNF43P17038 809 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 CDH2P19022 906 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-212ENST00000478616 KDELR2P33947 212 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 OR1E2P47887 323 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 UGT2B15P54855 530 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 C11orf71Q6IPW1 123 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 TSEN54Q7Z6J9 526 aaKnown RBP16.38■□□□□ 0.21
SREBF1-212ENST00000478616 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 RNF217Q8TC41 542 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 Q96MF0 132 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 ELAC2Q9BQ52 826 aaKnown RBP16.38■□□□□ 0.21
SREBF1-212ENST00000478616 GPR35Q9HC97 309 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 SH3GLB1Q9Y371 365 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 CORINQ9Y5Q5 1042 aa16.38■□□□□ 0.21
SREBF1-212ENST00000478616 NIPBLQ6KC79 2804 aaeCLIP16.38■□□□□ 0.21
SREBF1-212ENST00000478616 A0A096LPE4 126 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 IGHV1-18A0A0C4DH31 117 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 A0A1W2PPZ6 126 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 M0R1B8 84 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 ASAH2BP0C7U1 165 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 PTAFRP25105 342 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 CDKN1AP38936 164 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 CDH11P55287 796 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 ARF1P84077 181 aaKnown RBP16.37■□□□□ 0.21
SREBF1-212ENST00000478616 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
SREBF1-212ENST00000478616 PIN1Q13526 163 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-212ENST00000478616 ERICH5Q6P6B1 374 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 SSX8Q7RTT4 187 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 SPATA21Q7Z572 469 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 C20orf196Q8IYI0 205 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 PCYOX1LQ8NBM8 494 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 OR2T12Q8NG77 320 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 TMEM171Q8WVE6 324 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 COX4I2Q96KJ9 171 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 EPYCQ99645 322 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 NOX3Q9HBY0 568 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 C20orf141Q9NUB4 165 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 GID8Q9NWU2 228 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 CRNNQ9UBG3 495 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-212ENST00000478616 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 SNX13Q9Y5W8 968 aa16.37■□□□□ 0.21
SREBF1-212ENST00000478616 YLPM1P49750 1951 aaKnown RBP16.37■□□□□ 0.21
SREBF1-212ENST00000478616 RTTNQ86VV8 2226 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 ARPC4-TTLL3A0A0A6YYG9 625 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 SLC35F4A4IF30 521 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 ZNF587BE7ETH6 402 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 KPNA4O00629 521 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-212ENST00000478616 SNX3O60493 162 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 CH25HO95992 272 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 FOSL1P15407 271 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 GTF2E2P29084 291 aaKnown RBP16.36■□□□□ 0.21
SREBF1-212ENST00000478616 SLC7A2P52569 658 aa16.36■□□□□ 0.21
SREBF1-212ENST00000478616 RPS4XP62701 263 aaKnown RBP16.36■□□□□ 0.21
SREBF1-212ENST00000478616 POU3F1Q03052 451 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms