RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FAM166AQ6J272 317 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 SLC18B1Q6NT16 456 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 SLC22A25Q6T423 547 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 LRIG3Q6UXM1 1119 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF782Q6ZMW2 699 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 MEX3DQ86XN8 651 aaKnown RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 FBXL14Q8N1E6 418 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 ZCCHC24Q8N2G6 241 aaKnown RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 OR2C3Q8N628 320 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 CDRT4Q8N9R6 151 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 OR52E4Q8NGH9 312 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 OR6Y1Q8NGX8 325 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 CLHC1Q8NHS4 586 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 CDS1Q92903 461 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 CPNE4Q96A23 557 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 FAM120BQ96EK7 910 aaKnown RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 L3HYPDHQ96EM0 354 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 ARL5BQ96KC2 179 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 ADAD1Q96M93 576 aaKnown RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 MUS81Q96NY9 551 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 AMBRA1Q9C0C7 1298 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 CDC42EP4Q9H3Q1 356 aaKnown RBP3.97□□□□□ -1.77
CKS1B-207ENST00000477676 TUBB1Q9H4B7 451 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 FANCFQ9NPI8 374 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 MIEF1Q9NQG6 463 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 UBQLN4Q9NRR5 601 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 GIMAP2Q9UG22 337 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 BAIAP2L1Q9UHR4 511 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 SNX8Q9Y5X2 465 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 COL7A1Q02388 2944 aa3.97□□□□□ -1.77
CKS1B-207ENST00000477676 TANC2Q9HCD6 1990 aa3.96□□□□□ -1.77
CKS1B-207ENST00000477676 A0A1W2PPL8 197 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ATP6V1G2-DDX39BF2Z307 99 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 POC1B-GALNT4F8VUJ3 575 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 M0R1B8 84 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SPRY1O43609 319 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TBX19O60806 448 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TGFAP01135 160 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 HMGN2P05204 90 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ENO1P06733 434 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 FESP07332 822 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 INHBAP08476 426 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PABPC4LP0CB38 370 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 DHRS4L1P0CG22 281 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SDC1P18827 310 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PRPH2P23942 346 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ATP5F1P24539 256 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PTAFRP25105 342 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 EIF1P41567 113 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 GSTM5P46439 218 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 DIO1P49895 249 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SERPINB9P50453 376 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 P2RX1P51575 399 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PKNOX1P55347 436 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 LGALS3BPQ08380 585 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SELENBP1Q13228 472 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SKP2Q13309 424 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 KLF9Q13886 244 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 LASP1Q14847 261 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 QPRTQ15274 297 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TRIP10Q15642 601 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MAPK14Q16539 360 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ATP6AP1LQ52LC2 224 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 RFTN2Q52LD8 501 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ARL13AQ5H913 290 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PDSS1Q5T2R2 415 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 C9orf135Q5VTT2 229 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 FBXW9Q5XUX1 488 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 CLEC6AQ6EIG7 209 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF544Q6NX49 715 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 CDC73Q6P1J9 531 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 PGBD2Q6P3X8 592 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TMEM108Q6UXF1 575 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TIFABQ6ZNK6 161 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TMPPEQ6ZT21 453 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 GALNT5Q7Z7M9 940 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 P2RY8Q86VZ1 359 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MISPQ8IVT2 679 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SLC43A2Q8N370 569 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 C17orf53Q8N3J3 647 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 COX18Q8N8Q8 333 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 CEP70Q8NHQ1 597 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 FAM76AQ8TAV0 307 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 RFKQ969G6 155 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 C3orf49Q96BT1 292 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MUCL1Q96DR8 90 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 FBXO17Q96EF6 278 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 RADILQ96JH8 1075 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MS4A4EQ96PG1 132 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 TSSK3Q96PN8 268 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 OR5B2Q96R09 309 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 INPP5KQ9BT40 448 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 SHCBP1LQ9BZQ2 653 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 BPESC1Q9GZL8 116 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 REEP4Q9H6H4 257 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 C3orf14Q9HBI5 128 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms