RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SELPLGQ14242 412 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MESDQ14696 234 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KIR2DS5Q14953 304 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TPSAB1Q15661 275 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 GRK1Q15835 563 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 EXT1Q16394 746 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PTGISQ16647 500 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ADPRMQ3LIE5 342 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 COX19Q49B96 90 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 IFI44LQ53G44 452 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR2B11Q5JQS5 317 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SLC25A30Q5SVS4 291 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DNLZQ5SXM8 178 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 C9orf64Q5T6V5 341 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PRAMEF7Q5VXH5 474 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FBXW9Q5XUX1 488 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TXNDC8Q6A555 127 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DHRS7BQ6IAN0 325 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 UGT3A1Q6NUS8 523 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF544Q6NX49 715 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FAHD2BQ6P2I3 314 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF562Q6V9R5 426 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 C17orf107Q6ZR85 190 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CYS1Q717R9 158 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 S100A7AQ86SG5 101 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TMEM135Q86UB9 458 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TSPAN33Q86UF1 283 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 THOC6Q86W42 341 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 RAB43Q86YS6 212 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CALHM1Q8IU99 346 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TGIF2LXQ8IUE1 241 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FUNDC1Q8IVP5 155 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NAXDQ8IW45 347 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 UBQLNLQ8IYU4 475 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ABCA7Q8IZY2 2146 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CENPSQ8N2Z9 138 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PARP8Q8N3A8 854 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 METTL4Q8N3J2 472 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RIBC1Q8N443 379 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF611Q8N823 705 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NECAP1Q8NC96 275 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR2M7Q8NG81 312 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR8J3Q8NGG0 315 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR5T2Q8NGG2 359 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR5T3Q8NGG3 340 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR5D13Q8NGL4 314 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR11L1Q8NGX0 322 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR4K15Q8NH41 348 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 STOML3Q8TAV4 291 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DYNC2LI1Q8TCX1 351 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NSMAFQ92636 917 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CDS1Q92903 461 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DAZLQ92904 295 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ST6GALNAC6Q969X2 333 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SLC35C1Q96A29 364 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TM4SF19Q96DZ7 209 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CMTM5Q96DZ9 223 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 L3HYPDHQ96EM0 354 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CERS2Q96G23 380 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FAHD2AQ96GK7 314 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 COQ2Q96H96 371 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 AKR1E2Q96JD6 320 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 LRRC3BQ96PB8 259 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PANX3Q96QZ0 392 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR2V2Q96R30 315 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KCNA7Q96RP8 456 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MCCC1Q96RQ3 725 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 CCT8L2Q96SF2 557 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RNF2Q99496 336 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 IL12RB2Q99665 862 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MAP3K3Q99759 626 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SPAG8Q99932 426 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 TCEAL7Q9BRU2 100 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RSG1Q9BU20 258 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ABHD6Q9BV23 337 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TSSK1BQ9BXA7 367 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 LRRC2Q9BYS8 371 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ROPN1BQ9BZX4 212 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 TRIM9Q9C026 710 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ACTR6Q9GZN1 396 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ELOVL4Q9GZR5 314 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SRRQ9GZT4 340 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 LAT2Q9GZY6 243 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FZD8Q9H461 694 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ELOVL6Q9H5J4 265 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF430Q9H8G1 570 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 SRD5A3Q9H8P0 318 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MTHFD2LQ9H903 347 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ACTR8Q9H981 624 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NMNAT1Q9HAN9 279 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ROPN1Q9HAT0 212 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A7Q9HAW7 530 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 HHATLQ9HCP6 504 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MYOZ2Q9NPC6 264 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MYNNQ9NPC7 610 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SIRT7Q9NRC8 400 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 BABAM2Q9NXR7 383 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 HSPB7Q9UBY9 170 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MIOXQ9UGB7 285 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms