RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 KDM8Q8N371 416 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
ABCF3-211ENST00000475728 PIK3C3Q8NEB9 887 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 SGTBQ96EQ0 304 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 LINC00470Q9BZP3 86 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 ANKRD19PQ9H560 264 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 B3GAT1Q9P2W7 334 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 SEC14L4Q9UDX3 406 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 A4GNTQ9UNA3 340 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 ENPP4Q9Y6X5 453 aa12.74□□□□□ -0.37
ABCF3-211ENST00000475728 F8P00451 2351 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 ZFHX3Q15911 3703 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 DEFB108AA8MXU0 73 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 MS4A18H0YCH9 400 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 PDLIM1O00151 329 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 OR7A10O76100 309 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 AHCYP23526 432 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 PAX7P23759 505 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 HOXC12P31275 282 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 SELENOPP49908 381 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 SH3BGRP55822 239 aaPredicted RBP12.73□□□□□ -0.37
ABCF3-211ENST00000475728 ZP4Q12836 540 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 PPA1Q15181 289 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 TAB1Q15750 504 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 STK11Q15831 433 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 MS4A18Q3C1V0 323 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 NKAIN4Q8IVV8 208 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 GPR137CQ8N3F9 429 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 FAM156AQ8NDB6 213 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 TMEM255BQ8WV15 326 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
ABCF3-211ENST00000475728 MCUR1Q96AQ8 359 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 C1orf21Q9H246 121 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 MUC13Q9H3R2 512 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
ABCF3-211ENST00000475728 B3GAT2Q9NPZ5 323 aa12.73□□□□□ -0.37
ABCF3-211ENST00000475728 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
ABCF3-211ENST00000475728 ZNF726A6NNF4 738 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 LRRN3E7EW58 273 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ARPC2O15144 300 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 KLF4O43474 513 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 TRAF3IP2O43734 574 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 RAD51DO75771 328 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ZNF432O94892 652 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ITGA5P08648 1049 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ASAH2BP0C7U1 165 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 RHCEP18577 417 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 YAP1P46937 504 aaKnown RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 UGT2B15P54855 530 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 SMIM11AP58511 58 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 MTX3Q5HYI7 312 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 HMBOX1Q6NT76 420 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 CDK20Q8IZL9 346 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 RNF113BQ8IZP6 322 aaKnown RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 LIPHQ8WWY8 451 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ACOT11Q8WXI4 607 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 NINJ1Q92982 152 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 PYURFQ96I23 114 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 MUS81Q96NY9 551 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 MEPEQ9NQ76 525 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 AMDHD2Q9Y303 409 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 MAGED1Q9Y5V3 778 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-211ENST00000475728 CELSR1Q9NYQ6 3014 aa12.72□□□□□ -0.37
ABCF3-211ENST00000475728 NF1P21359 2839 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 SPG11Q96JI7 2443 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 MPDZO75970 2070 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-211ENST00000475728 RNF13O43567 381 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 STAMBPO95630 424 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 WNT11O96014 354 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 HPRP00739 348 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 FUT1P19526 365 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 GABRA6Q16445 453 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 ANKDD1AQ495B1 522 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 ALKBH2Q6NS38 261 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 C22orf34Q6ZV56 151 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 SLC46A3Q7Z3Q1 461 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 PFN4Q8NHR9 129 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 PLPPR2Q96GM1 343 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 BOD1Q96IK1 185 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 LRR1Q96L50 414 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 NMNAT1Q9HAN9 279 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-211ENST00000475728 MOV10Q9HCE1 1003 aaKnown RBP12.71□□□□□ -0.37
ABCF3-211ENST00000475728 OBP2BQ9NPH6 170 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 NDUFAF4Q9P032 175 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms