RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 OBP2BQ9NPH6 170 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 THUMPD1Q9NXG2 353 aaKnown RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 B3GNT2Q9NY97 397 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 NKIRAS1Q9NYS0 192 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF224Q9NZL3 707 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 CCDC167Q9P0B6 97 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 A0A0B4J2E0 115 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 A0A1B0GX12 115 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 LRRN3E7EW58 273 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 C3orf80F5H4A9 247 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 M0R3G1 203 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 SEC14L2O76054 403 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 LYPD3O95274 346 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 AHSA1O95433 338 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 TGDSO95455 350 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 CRYAAP02489 173 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 THY1P04216 161 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 FAM157CP0CG43 387 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ARAFP10398 606 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 CBR1P16152 277 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF16P17020 682 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF43P17038 809 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 THBS4P35443 961 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 NR4A2P43354 598 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 CDK6Q00534 326 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 CHRNB3Q05901 458 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 EFNB3Q15768 340 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 DUSP7Q16829 419 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 CEACAM16Q2WEN9 425 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 C3orf36Q3SXR2 165 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 GCNT6Q5T4J0 391 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 FAM69AQ5T7M9 428 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 REEP3Q6NUK4 255 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 PODNL1Q6PEZ8 512 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ULK3Q6PHR2 472 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 DHRS4L2Q6PKH6 230 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 VHLLQ6RSH7 139 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 LINC00114Q6XXX2 140 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 H1FNTQ75WM6 255 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ABHD12BQ7Z5M8 362 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 TSPYL5Q86VY4 417 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 PTOV1Q86YD1 416 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 C20orf196Q8IYI0 205 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 NUP37Q8NFH4 326 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 BBS10Q8TAM1 723 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 SLC38A4Q969I6 547 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 MSI2Q96DH6 328 aaKnown RBP6.08□□□□□ -1.44
HDAC3-207ENST00000475549 MOGAT1Q96PD6 335 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 EMC6Q9BV81 110 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 ARMC7Q9H6L4 198 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 C12orf10Q9HB07 376 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 NOX3Q9HBY0 568 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 TCF7L2Q9NQB0 619 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM160Q9NX00 188 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 KLHL14Q9P2G3 628 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 RCE1Q9Y256 329 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 PMF1-BGLAPU3KQ54 211 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 PLCE1Q9P212 2302 aa6.08□□□□□ -1.44
HDAC3-207ENST00000475549 TRAV36DV7A0A075B6V5 113 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 A0A087WUJ7 227 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 IGHV2OR16-5A0A0B4J2B6 119 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 LOC390937A0A1W2PQ73 354 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 LRP5LA4QPB2 252 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 OR6C65A6NJZ3 312 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 RNF212BA8MTL3 300 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF99A8MXY4 864 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 B9A039 149 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 PLPP3O14495 311 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 AIM2O14862 343 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 PHF1O43189 567 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 OR2T1O43869 369 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 ERLIN1O75477 346 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 MFN2O95140 757 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 HLA-HP01893 362 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 BGLAPP02818 100 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 BMP4P12644 408 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF35P13682 527 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 IGFBP5P24593 272 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 AQP1P29972 269 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 IL2RGP31785 369 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 IDH3GP51553 393 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 CRYBA2P53672 197 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 CDH12P55289 794 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 UBE2NP61088 152 aaKnown RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 SELPLGQ14242 412 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 GGTLC2Q14390 218 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 OR1Q1Q15612 314 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 NPTX1Q15818 432 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 RUNDC3AQ59EK9 446 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 TTMPQ5BVD1 217 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 ALG10BQ5I7T1 473 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 CARD17Q5XLA6 110 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 FAM91A1Q658Y4 838 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 KLHL24Q6TFL4 600 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 WDR88Q6ZMY6 472 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF627Q7L945 461 aa6.07□□□□□ -1.44
HDAC3-207ENST00000475549 NET1Q7Z628 596 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-207ENST00000475549 MDP1Q86V88 176 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms