RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C1QTNF6Q9BXI9 259 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 LINC00470Q9BZP3 86 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 ALG2Q9H553 416 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 MS4A18H0YCH9 400 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 NDUFAB1O14561 156 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 ABCD4O14678 606 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 SERPINI2O75830 405 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF432O94892 652 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 AHCYP23526 432 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 ROR2Q01974 943 aaKnown RBP21.07■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF74Q16587 644 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 MS4A18Q3C1V0 323 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 C8orf82Q6P1X6 216 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-223ENST00000475146 TMEM108Q6UXF1 575 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 LINGO2Q7L985 606 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 GPR137CQ8N3F9 429 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 OR5J2Q8NH18 312 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 LILRB1Q8NHL6 650 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-223ENST00000475146 LZICQ8WZA0 190 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 FBXW5Q969U6 566 aa21.07■□□□□ 0.96
CPNE1-223ENST00000475146 C11orf98E9PRG8 122 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 CXCR6O00574 342 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PLPP3O14495 311 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 DYNC1I1O14576 645 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 OR5F1O95221 314 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 OR6A2O95222 327 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 HLA-DOBP13765 273 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 GSK3BP49841 420 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PRPS1P60891 318 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PSME3P61289 254 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 SELENOWP63302 87 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 ADAM8P78325 824 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 NKX6-1P78426 367 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 SLC25A3Q00325 362 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 FOXD4Q12950 439 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PIN1Q13526 163 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF672Q499Z4 452 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 HIKESHIQ53FT3 197 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 CARD17Q5XLA6 110 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PIAS4Q8N2W9 510 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PIK3C3Q8NEB9 887 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 OR1K1Q8NGR3 316 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 TMEM171Q8WVE6 324 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PERPQ96FX8 193 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 OR2M2Q96R28 347 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 KCTD14Q9BQ13 255 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 PRSS27Q9BQR3 290 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF426Q9BUY5 554 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 SLC19A3Q9BZV2 496 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 POLR2J2Q9GZM3 115 aaKnown RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 POLR2J3Q9H1A7 115 aaKnown RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 FKRPQ9H9S5 495 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 RIMS3Q9UJD0 308 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 NOX1Q9Y5S8 564 aa21.06■□□□□ 0.96
CPNE1-223ENST00000475146 MAGED1Q9Y5V3 778 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF682O95780 498 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 WNT11O96014 354 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 ADORA3P0DMS8 318 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 UMPSP11172 480 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 PTAFRP25105 342 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 CDH11P55287 796 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 TBRG1Q3YBR2 411 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 EMC6Q9BV81 110 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 NANSQ9NR45 359 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 MED29Q9NX70 200 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 ARL2BPQ9Y2Y0 163 aa21.05■□□□□ 0.96
CPNE1-223ENST00000475146 SHISA9B4DS77 424 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 HIST1H2ABP04908 130 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 CD99P14209 185 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 CD40P25942 277 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 SH3BGRP55822 239 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-223ENST00000475146 UBE2NP61088 152 aaKnown RBP21.04■□□□□ 0.96
CPNE1-223ENST00000475146 SPOCK1Q08629 439 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 SLC22A25Q6T423 547 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 HIST3H2AQ7L7L0 130 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 VTCN1Q7Z7D3 282 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 NKAIN4Q8IVV8 208 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 TMEM123Q8N131 208 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 LRRC75A-AS1Q8N1F1 130 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 WFDC11Q8NEX6 87 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 HIST1H2ACQ93077 130 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 TXNDC15Q96J42 360 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 CXorf56Q9H5V9 222 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF229Q9UJW7 825 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 POU2F3Q9UKI9 436 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 MGAT4BQ9UQ53 548 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 LAMP3Q9UQV4 416 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 CADP27708 2225 aa21.04■□□□□ 0.96
CPNE1-223ENST00000475146 ARHGEF9O43307 516 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 RBM34P42696 430 aaKnown RBP21.03■□□□□ 0.96
CPNE1-223ENST00000475146 UGT2B15P54855 530 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 Q5PR19 223 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 SHEQ5VZ18 495 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 PXKQ7Z7A4 578 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 LRRC17Q8N6Y2 441 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 PFN4Q8NHR9 129 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 TMEM255BQ8WV15 326 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 FAM162AQ96A26 154 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 RADILQ96JH8 1075 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 PRRC1Q96M27 445 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms