RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OR2M2Q96R28 347 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF607Q96SK3 696 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ARHGDIGQ99819 225 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 KAT8Q9H7Z6 458 aaKnown RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 SEC61A2Q9H9S3 476 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 BARX1Q9HBU1 254 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ADAM21Q9UKJ8 722 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 IGHV4-30-2A0A087WSY4 118 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 A0A096LPE4 126 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 A0A1W2PPZ6 126 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF503-AS2A6NEH8 195 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 LRRN3E7EW58 273 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 H7C417 338 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 M0QX08 132 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 FBP2O00757 339 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 AIM2O14862 343 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 SERPINB7O75635 380 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 KRT33AO76009 404 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 IGLV1-44P01699 117 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 THY1P04216 161 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 CRYBA2P53672 197 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 ARF1P84077 181 aaKnown RBP16.17■□□□□ 0.18
COL7A1-209ENST00000474432 RBBP4Q09028 425 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 SWI5Q1ZZU3 235 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 ANKRD16Q6P6B7 361 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 MYPOPQ86VE0 399 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-209ENST00000474432 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 C11orf65Q8NCR3 313 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 ANKK1Q8NFD2 765 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 TSPEARQ8WU66 669 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 SLC38A2Q96QD8 506 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 FKRPQ9H9S5 495 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 GPR35Q9HC97 309 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 DNHD1Q96M86 4753 aa16.17■□□□□ 0.18
COL7A1-209ENST00000474432 CHD3Q12873 2000 aaKnown RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 KIAA1324LA8MWY0 1029 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 M0R3H8 397 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 OPN1SWP03999 348 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 APOBEC3AP31941 199 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 KLHL24Q6TFL4 600 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 WDR88Q6ZMY6 472 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 RBM45Q8IUH3 476 aaKnown RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 BHLHE22Q8NFJ8 381 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 OR6T1Q8NGN1 323 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 ADAD1Q96M93 576 aaKnown RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF317Q96PQ6 595 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-209ENST00000474432 TMEM43Q9BTV4 400 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 TMEM27Q9HBJ8 222 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 ANGPT4Q9Y264 503 aa16.16■□□□□ 0.18
COL7A1-209ENST00000474432 SLC43A1O75387 559 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 IGKV3-15P01624 115 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 CECR9P0C854 216 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 CD247P20963 164 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 GTF2E2P29084 291 aaKnown RBP16.15■□□□□ 0.18
COL7A1-209ENST00000474432 CALCRP30988 508 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 C3orf36Q3SXR2 165 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 METTL21CQ5VZV1 264 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 HMBOX1Q6NT76 420 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 FAM169BQ8N8A8 192 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 TAMM41Q96BW9 452 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 TXNDC15Q96J42 360 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 MCHR1Q99705 422 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 EVA1AQ9H8M9 152 aa16.15■□□□□ 0.18
COL7A1-209ENST00000474432 A0A0G2JND7 137 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 ANGPT2O15123 496 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 GPRIN2O60269 458 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 FMO6PO60774 539 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 LY6HO94772 140 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 C8BP07358 591 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CELA3BP08861 270 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 HOXB1P14653 301 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 NUDT6P53370 316 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 SH3BGRP55822 239 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 NAAAQ02083 359 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 C1DQ13901 141 aaKnown RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 NFYCQ13952 458 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 RAB35Q15286 201 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CYP51A1Q16850 503 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CEACAM16Q2WEN9 425 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 SWT1Q5T5J6 900 aaKnown RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CGB2Q6NT52 195 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 C20orf196Q8IYI0 205 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF525Q8N782 197 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 SCAIQ8N9R8 606 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 NANOS1Q8WY41 292 aaKnown RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 SIKE1Q9BRV8 207 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 EMC6Q9BV81 110 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 KATNB1Q9BVA0 655 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CRLF2Q9HC73 371 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 MRPL39Q9NYK5 338 aaKnown RBP16.14■□□□□ 0.17
COL7A1-209ENST00000474432 TRIM33Q9UPN9 1127 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 CORINQ9Y5Q5 1042 aa16.14■□□□□ 0.17
COL7A1-209ENST00000474432 FXYD1O00168 92 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 PLPP3O14495 311 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 CRLF1O75462 422 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 PCGF2P35227 344 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 UBE2NP61088 152 aaKnown RBP16.13■□□□□ 0.17
COL7A1-209ENST00000474432 NCALDP61601 193 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 PPP2R2BQ00005 443 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 HGFACQ04756 655 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms