RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SCAIQ8N9R8 606 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 C11orf65Q8NCR3 313 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 RNF217Q8TC41 542 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 FBXO17Q96EF6 278 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 CPPED1Q9BRF8 314 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 ASPNQ9BXN1 380 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 RSPO3Q9BXY4 272 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 IKZF5Q9H5V7 419 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 YAE1D1Q9NRH1 226 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 FBXO9Q9UK97 447 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 TRIM33Q9UPN9 1127 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 FKBP7Q9Y680 259 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 IGKV1D-42A0A075B6H8 117 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A096LPE4 126 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A0B4J2E0 115 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A1B0GX12 115 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A1W2PPZ6 126 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 PDE5AO76074 875 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 F12P00748 615 aaPredicted RBP17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 NQO1P15559 274 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 AQP1P29972 269 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 RBBP4Q09028 425 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 OR1Q1Q15612 314 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 ADRM1Q16186 407 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 SWI5Q1ZZU3 235 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 GLIPR1L2Q4G1C9 344 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 RUNDC3AQ59EK9 446 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 COMTD1Q86VU5 262 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 UEVLDQ8IX04 471 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 OR4F15Q8NGB8 312 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 PROX1Q92786 737 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 MAGEB18Q96M61 343 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 TNFRSF13CQ96RJ3 184 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 GPR35Q9HC97 309 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 CA10Q9NS85 328 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 SEC14L4Q9UDX3 406 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 ADAM21Q9UKJ8 722 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 NDUFAF1Q9Y375 327 aa17.73■□□□□ 0.43
PDLIM4-206ENST00000474421 VSTM5A8MXK1 200 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 ANGPT2O15123 496 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 IGLV1-44P01699 117 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 SERPINF1P36955 418 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 ARF1P84077 181 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 NAAAQ02083 359 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 HDXQ7Z353 690 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 DHDDSQ86SQ9 333 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 DPP10Q8N608 796 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 C10orf105Q8TEF2 133 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 TSPEARQ8WU66 669 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 CKAP2Q8WWK9 683 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 HTRA1Q92743 480 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 SLC41A3Q96GZ6 507 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 OR2M2Q96R28 347 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 SIKE1Q9BRV8 207 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 TMEM43Q9BTV4 400 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 NELFAQ9H3P2 528 aa17.72■□□□□ 0.43
PDLIM4-206ENST00000474421 YLPM1P49750 1951 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 DNHD1Q96M86 4753 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A096LNT2 108 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 A8MV72 311 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 B9A039 149 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 TRAF3IP2O43734 574 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 FMO6PO60774 539 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 MFN2O95140 757 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 IGKV3-15P01624 115 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 CECR9P0C854 216 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 CBR1P16152 277 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 CYP51A1Q16850 503 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 MST1LQ2TV78 715 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 CEACAM16Q2WEN9 425 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 TMEM249Q2WGJ8 235 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 ZNF613Q6PF04 617 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 HIPK1Q86Z02 1210 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 SLC30A8Q8IWU4 369 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 IL17RDQ8NFM7 739 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 ANKRD27Q96NW4 1050 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 PRR14Q9BWN1 585 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 CRLF2Q9HC73 371 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 B3GAT2Q9NPZ5 323 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 NOX1Q9Y5S8 564 aa17.71■□□□□ 0.43
PDLIM4-206ENST00000474421 ATRQ13535 2644 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF99A8MXY4 864 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 MS4A18H0YCH9 400 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 C8BP07358 591 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 CBLP22681 906 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 ARR3P36575 388 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 PCBP3P57721 371 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 TUBA1BP68363 451 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 TUBA4AP68366 448 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 VLDLRP98155 873 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 PMS2P3Q13401 168 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 EFNB3Q15768 340 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 MS4A18Q3C1V0 323 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 TUBA1AQ71U36 451 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 SLC46A3Q7Z3Q1 461 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 SNX32Q86XE0 403 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 TMEM123Q8N131 208 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 NUP37Q8NFH4 326 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 LRR1Q96L50 414 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 CGREF1Q99674 301 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms