RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 COPS3Q9UNS2 423 aa16.24■□□□□ 0.19
VARS2-206ENST00000473916 SLC6A5Q9Y345 797 aa16.24■□□□□ 0.19
VARS2-206ENST00000473916 PLPP3O14495 311 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 TP53I11O14683 189 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 DXOO77932 396 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 GPANK1O95872 356 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 IMPDH2P12268 514 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 APOBEC1P41238 236 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 TGM4P49221 684 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 DLX5P56178 289 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 OR12D2P58182 307 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 RPS15P62841 145 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 GGTLC2Q14390 218 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 PON3Q15166 354 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 OTPQ5XKR4 325 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 RPTNQ6XPR3 784 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 WDFY1Q8IWB7 410 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 TMEM156Q8N614 296 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 C1GALT1C1Q96EU7 318 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 C4orf36Q96KX1 117 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 UBL7Q96S82 380 aaPredicted RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 SRA1Q9HD15 236 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 SH2D2AQ9NP31 389 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 ISYNA1Q9NPH2 558 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 LOC101059948A0A1B0GTJ6 334 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 METTL15A6NJ78 407 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 ETV2O00321 342 aaPredicted RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 TERTO14746 1132 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 ARHGEF9O43307 516 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 MSX1P28360 303 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 SHC1P29353 583 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 IDUAP35475 653 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 RPS19P39019 145 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 TUBA1BP68363 451 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 DCTN2Q13561 401 aaKnown RBP16.23■□□□□ 0.19
VARS2-206ENST00000473916 ACKR1Q16570 336 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 STPG1Q5TH74 334 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 TMEM164Q5U3C3 297 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 TUBA1AQ71U36 451 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 OR6V1Q8N148 313 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 FADS6Q8N9I5 356 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 OR4K17Q8NGC6 315 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 OR6Q1Q8NGQ2 317 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 MCFD2Q8NI22 146 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 ALG12Q9BV10 488 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 SYT4Q9H2B2 425 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 CPNE5Q9HCH3 593 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 SDHAF3Q9NRP4 125 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 INIPQ9NRY2 104 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 GRIP1Q9Y3R0 1128 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 PCDHGB6Q9Y5F9 930 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 MED13Q9UHV7 2174 aa16.23■□□□□ 0.19
VARS2-206ENST00000473916 CNOT1A5YKK6 2376 aaKnown RBP16.22■□□□□ 0.19
VARS2-206ENST00000473916 A0A0G2JMM0 328 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 A0A1W2PPB8 328 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 A0A1W2PRS3 328 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 SMIM30A4D0T7 59 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 KIR3DP1A8MWS1 328 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 J3QLW9 94 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 AKAP8O43823 692 aaKnown RBP16.22■□□□□ 0.19
VARS2-206ENST00000473916 HPP00738 406 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 TFPIP10646 304 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 ZNF19P17023 458 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 EIF3IQ13347 325 aaKnown RBP16.22■□□□□ 0.19
VARS2-206ENST00000473916 ATP1A4Q13733 1029 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 MELKQ14680 651 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 CRTC2Q53ET0 693 aaPredicted RBP16.22■□□□□ 0.19
VARS2-206ENST00000473916 TMPRSS11AQ6ZMR5 421 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 SLC35F2Q8IXU6 374 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 PM20D2Q8IYS1 436 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 ESX1Q8N693 406 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 NLGN4YQ8NFZ3 816 aaPredicted RBP16.22■□□□□ 0.19
VARS2-206ENST00000473916 FRMD6Q96NE9 622 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 GNRHR2Q96P88 292 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 SSR3Q9UNL2 185 aa16.22■□□□□ 0.19
VARS2-206ENST00000473916 PRR32B1ATL7 298 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 F10P00742 488 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 CD63P08962 238 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 CLEC2LP0C7M8 214 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 GABRA5P31644 462 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 MXD1Q05195 221 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 RUNX1T1Q06455 604 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 ACSM1Q08AH1 577 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 ZNF404Q494X3 552 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 TP53I3Q53FA7 332 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 SLC25A53Q5H9E4 307 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 PAQR8Q8TEZ7 354 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 MRGPRX4Q96LA9 322 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 FOXN4Q96NZ1 517 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 HDHD5Q9BXW7 423 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 BARHL1Q9BZE3 327 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 AKIP1Q9NQ31 210 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 HPF1Q9NWY4 346 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 BABAM2Q9NXR7 383 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 IL17BQ9UHF5 180 aa16.21■□□□□ 0.19
VARS2-206ENST00000473916 RPH3AQ9Y2J0 694 aaPredicted RBP16.21■□□□□ 0.19
VARS2-206ENST00000473916 TVP23AA6NH52 213 aa16.21■□□□□ 0.18
VARS2-206ENST00000473916 ZNF670-ZNF695F2Z2N8 137 aa16.21■□□□□ 0.18
VARS2-206ENST00000473916 MS4A18H0YCH9 400 aa16.21■□□□□ 0.18
VARS2-206ENST00000473916 GLCEO94923 617 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms