RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZDHHC4Q9NPG8 344 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR5V1Q9UGF6 321 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TBX21Q9UL17 535 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 KCNK6Q9Y257 313 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SZT2Q5T011 3432 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 RANBP2P49792 3224 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 PRRT4C9JH25 899 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 H3BUI4 141 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TRIM77I1YAP6 450 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 CDC123O75794 336 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 CD2P06729 351 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 GTF2F2P13984 249 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 FUT1P19526 365 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ENPP1P22413 925 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 KIAA1024LP59773 190 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SCRN3Q0VDG4 424 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF141Q15928 474 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 C4orf46Q504U0 113 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF776Q68DI1 518 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR5M10Q6IEU7 315 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 LINC00114Q6XXX2 140 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TMPRSS12Q86WS5 348 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF595Q8IYB9 648 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF676Q8N7Q3 588 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF614Q8N883 585 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TMEM229BQ8NBD8 167 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR13C5Q8NGS8 318 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 HOXB13Q92826 284 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZFYVE21Q9BQ24 234 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TM7SF3Q9NS93 570 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ACTR10Q9NZ32 417 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 NDRG3Q9UGV2 375 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 FLVCR2Q9UPI3 526 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 YBX2Q9Y2T7 364 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 PRELID3BQ9Y3B1 194 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR1A2Q9Y585 309 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 HRH3Q9Y5N1 445 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 A0A087WUJ7 227 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 A0A1W2PPK0 400 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 RAB19A4D1S5 217 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GGT3PA6NGU5 568 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 PRR19A6NJB7 356 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 C4orf51C9J302 202 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GOSR2O14653 212 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 HRGP04196 525 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 IL9P15248 144 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CSF2RBP32927 897 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 MAP3K8P41279 467 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 RAB38P57729 211 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ERVFC1P60507 584 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 DEFB103AP81534 67 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 RAB11BQ15907 218 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GLT8D1Q68CQ7 371 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ENPP7Q6UWV6 458 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SLC36A1Q7Z2H8 476 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 VN1R4Q7Z5H5 301 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 OOSP2Q86WS3 158 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 C12orf45Q8N5I9 185 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZDHHC1Q8WTX9 485 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 TOE1Q96GM8 510 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 SCARF2Q96GP6 870 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 ALG12Q9BV10 488 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GAREM1Q9H706 876 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZNF175Q9Y473 711 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 MYOFQ9NZM1 2061 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 DISC1C4P0D8 188 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 H7C2Y5 167 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 NUDT21O43809 227 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 RASGRP1O95267 797 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GYPBP06028 91 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CD14P08571 375 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SLC25A4P12235 298 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZNF35P13682 527 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CEBPBP17676 345 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ANXA7P20073 488 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 ITPKBP27987 946 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 S100A12P80511 92 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SIM1P81133 766 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 MAT1AQ00266 395 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 ENPP2Q13822 863 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 TUSC1Q2TAM9 212 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 PRICKLE4Q2TBC4 344 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 DEFB134Q4QY38 66 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 AGBL4Q5VU57 503 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ALKAL2Q6UX46 152 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ESPNLQ6ZVH7 1005 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SSX6Q7RTT6 188 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 SPAG16Q8N0X2 631 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 NPEPL1Q8NDH3 523 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 LIPHQ8WWY8 451 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ARMC5Q96C12 935 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZNF587Q96SQ5 575 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 PDCD1LG2Q9BQ51 273 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 POT1Q9NUX5 634 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 DNAJB12Q9NXW2 375 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 MRPL15Q9P015 296 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 USP36Q9P275 1121 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 KLK11Q9UBX7 282 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms