RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CDC14BO60729 498 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 HPRP00739 348 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 BPGMP07738 259 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ERCC1P07992 297 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 PATE4P0C8F1 98 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 NR2F1P10589 423 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF14P17017 642 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 CBLP22681 906 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ARR3P36575 388 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 CAPZA2P47755 286 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 MAP2K6P52564 334 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 UFM1P61960 85 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 DEFA6Q01524 100 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 GSTA3Q16772 222 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 CARD17Q5XLA6 110 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 SHQ1Q6PI26 577 aaKnown RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 TMEM123Q8N131 208 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 RIBC1Q8N443 379 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 GTF3AQ92664 365 aaKnown RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 TESCQ96BS2 214 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ZMYND19Q96E35 227 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 CCDC115Q96NT0 180 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF317Q96PQ6 595 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-209ENST00000473421 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 TAPBPLQ9BX59 468 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 RASD1Q9Y272 281 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 TRIM77I1YAP6 450 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 M0R233 179 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 PPIHO43447 177 aaKnown RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 PLPP2O43688 288 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 TRAF3IP2O43734 574 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 DEAF1O75398 565 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 VAMP5O95183 116 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 CLPTM1O96005 669 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 PNPP00491 289 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 DBIP07108 87 aaKnown RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 ALDOCP09972 364 aaKnown RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 ARAFP10398 606 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 ACHEP22303 614 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 ETV4P43268 484 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 SH3BGRP55822 239 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 MVKQ03426 396 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 FXNQ16595 210 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 WBP2NLQ6ICG8 309 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 USP43Q70EL4 1123 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 COMTD1Q86VU5 262 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 OR52P1PQ8NH57 321 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 MFSD8Q8NHS3 518 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 RNF217Q8TC41 542 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 RDH5Q92781 318 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 TAAR8Q969N4 342 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 DUX5Q96PT3 197 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 FBXO9Q9UK97 447 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-209ENST00000473421 GRIP1Q9Y3R0 1128 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 CACNG2Q9Y698 323 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 DSPPQ9NZW4 1301 aa10.79□□□□□ -0.68
TRAF4-209ENST00000473421 IGKV1D-42A0A075B6H8 117 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 WDR91A4D1P6 747 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF99A8MXY4 864 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 MS4A18H0YCH9 400 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 M0R082 166 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 SLC43A1O75387 559 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 CD79AP11912 226 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ETFAP13804 333 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF43P17038 809 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 PCMT1P22061 227 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 EVX1P49640 407 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ERVS71-1P61550 626 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 MAD2L1Q13257 205 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 MS4A18Q3C1V0 323 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 GTDC1Q4AE62 458 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 SLC9B1Q4ZJI4 515 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF621Q6ZSS3 439 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF771Q7L3S4 317 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF584Q8IVC4 421 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 GPR137CQ8N3F9 429 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 PAQR4Q8N4S7 273 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 OR51F2Q8NH61 342 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 OXGR1Q96P68 337 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF587Q96SQ5 575 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 SORT1Q99523 831 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 RBM4Q9BWF3 364 aaKnown RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 OPN4Q9UHM6 478 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 RCE1Q9Y256 329 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF443Q9Y2A4 671 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-209ENST00000473421 PPIAL4AQ9Y536 164 aa10.78□□□□□ -0.68
TRAF4-209ENST00000473421 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.68
TRAF4-209ENST00000473421 VWFP04275 2813 aa10.77□□□□□ -0.68
TRAF4-209ENST00000473421 TRAV20A0A0B4J274 112 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms