RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SLC31A2O15432 143 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 PALMO75781 387 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 OR7A10O76100 309 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 IGHDP01880 384 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 RCC1P18754 421 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-209ENST00000472044 GSSP48637 474 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 MRPL28Q13084 256 aaKnown RBP2.5□□□□□ -2.01
PTCD3-209ENST00000472044 DDX39BQ13838 428 aaKnown RBP2.5□□□□□ -2.01
PTCD3-209ENST00000472044 CYTH1Q15438 398 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 PHYHD1Q5SRE7 291 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 IGFL2Q6UWQ7 119 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 C6orf89Q6UWU4 347 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 SLC34A3Q8N130 599 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 VN1R2Q8NFZ6 395 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 NPBQ8NG41 125 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 OR6X1Q8NH79 312 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 FAM110BQ8TC76 370 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 NDRG1Q92597 394 aaKnown RBP2.5□□□□□ -2.01
PTCD3-209ENST00000472044 RDH5Q92781 318 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.5□□□□□ -2.01
PTCD3-209ENST00000472044 MFFQ9GZY8 342 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 PPA2Q9H2U2 334 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 SRMSQ9H3Y6 488 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 CCL28Q9NRJ3 127 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 TP53TG5Q9Y2B4 290 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 PEX16Q9Y5Y5 336 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 SLC25A15Q9Y619 301 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 A0A1W2PPV9 198 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 TOM1O60784 492 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 KLF8O95600 359 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 MOSP00540 346 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 IGHV2-5P01817 119 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ATP1B2P14415 290 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ETS2P15036 469 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ABOP16442 354 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 BTCP35070 178 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 HSD17B2P37059 387 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 CRYBB2P43320 205 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 NPBWR2P48146 333 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 GK3PQ14409 553 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 KIAA0087Q14695 138 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 MAJINQ3KP22 176 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 KCTD21Q4G0X4 260 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF658BQ4V348 819 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 TMEM255AQ5JRV8 349 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 UQCC3Q6UW78 93 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 SLC25A48Q6ZT89 311 aaKnown RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 EGFL6Q8IUX8 553 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ACOT4Q8N9L9 421 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 FAM210BQ96KR6 192 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 IFT74Q96LB3 600 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 TCEANC2Q96MN5 208 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 FMO2Q99518 471 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 PELOQ9BRX2 385 aaKnown RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 GCOM2Q9BZD3 368 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 ROPN1BQ9BZX4 212 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 SIAEQ9HAT2 523 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 CALYQ9NYX4 217 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 XCL2Q9UBD3 114 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 NUFIP1Q9UHK0 495 aaKnown RBP2.49□□□□□ -2.01
PTCD3-209ENST00000472044 MMP17Q9ULZ9 603 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 NEU3Q9UQ49 428 aa2.49□□□□□ -2.01
PTCD3-209ENST00000472044 CDHR2Q9BYE9 1310 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 IGLV3-22A0A075B6J6 115 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PPIAL4EA0A075B759 164 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 RBMY1BA6NDE4 496 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 RBMY1EA6NEQ0 496 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 H0Y8G0 127 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 NDUFB10O96000 172 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 MMP1P03956 469 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 GAPDHP04406 335 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 RBMY1DP0C7P1 496 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 RBMY1A1P0DJD3 496 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PPIAL4FP0DN26 164 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SLC2A3P11169 496 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PSG2P11465 335 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 HPGDP15428 266 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 TAGLN2P37802 199 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SULT1E1P49888 294 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 LHX2P50458 406 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 BST1Q10588 318 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PDIA2Q13087 525 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PPIL2Q13356 520 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 FRMPD2BQ6IN97 320 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 LRRC31Q6UY01 552 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 TMEM61Q8N0U2 210 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 OR1N2Q8NGR9 330 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 FANK1Q8TC84 345 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SRSF12Q8WXF0 261 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SMARCD2Q92925 531 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 C12orf42Q96LP6 360 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 MS4A4EQ96PG1 132 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 PANX2Q96RD6 677 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SLC25A39Q9BZJ4 359 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 MRPL47Q9HD33 250 aaKnown RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF331Q9NQX6 463 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-209ENST00000472044 EXD2Q9NVH0 621 aa2.48□□□□□ -2.01
PTCD3-209ENST00000472044 SUN2Q9UH99 717 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms