RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CD34P28906 385 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 AGTR1P30556 359 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CD68P34810 354 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 NPBWR1P48145 328 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 THBS3P49746 956 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 HTR4Q13639 388 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 HABP2Q14520 560 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 IL11RAQ14626 422 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SPATS1Q496A3 300 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 BRICD5Q6PL45 260 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 TMEM108Q6UXF1 575 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ZNF836Q6ZNA1 936 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CMTM2Q8TAZ6 248 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ELMOD3Q96FG2 381 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SORCS2Q96PQ0 1159 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 DCSTAMPQ9H295 470 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CSNK1G1Q9HCP0 422 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 PIGLQ9Y2B2 252 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 C5P01031 1676 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 DVL1O14640 695 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 HSD17B6O14756 317 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 XPNPEP2O43895 674 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 LCMT2O60294 686 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 EEDO75530 441 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 PRKRAO75569 313 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 IFNA10P01566 189 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ETS2P15036 469 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CD82P27701 267 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 DVL1P1P54792 670 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 RIPPLY1Q0D2K3 151 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 THSD4Q6ZMP0 1018 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 GALNT16Q8N428 558 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CT55Q8WUE5 264 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 FOXRED1Q96CU9 486 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 AKR1E2Q96JD6 320 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 MKRN2Q9H000 416 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 ACSS1Q9NUB1 689 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 AIG1Q9NVV5 245 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SGCEO43556 437 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 RAB3BP20337 219 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 HOXD13P35453 343 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 LIM2P55344 173 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 AADACL4Q5VUY2 407 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 AGAP6Q5VW22 663 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ZNF574Q6ZN55 896 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 LINC00346Q8IVM7 164 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 TMEM102Q8N9M5 508 aaPredicted RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 SLC37A3Q8NCC5 494 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ASB5Q8WWX0 329 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 PRRC1Q96M27 445 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 ALG8Q9BVK2 526 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 HHLA2Q9UM44 414 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SLC22A7Q9Y694 548 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 CITO14578 2027 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 UBCP0CG48 685 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 IVDP26440 423 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 FKBP2P26885 142 aaKnown RBP7.92□□□□□ -1.14
CD47-204ENST00000471694 MTNR1AP48039 350 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 LETMD1Q6P1Q0 360 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SLC35D2Q76EJ3 337 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 COX15Q7KZN9 410 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SLC25A18Q9H1K4 315 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SLC39A9Q9NUM3 307 aa7.92□□□□□ -1.14
CD47-204ENST00000471694 SH2D1BO14796 132 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 C7P10643 843 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 PRF1P14222 555 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 TNFRSF1AP19438 455 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 SSTP61278 116 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 HTD2P86397 168 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 NPY5RQ15761 445 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 ZNF791Q3KP31 576 aaPredicted RBP7.91□□□□□ -1.14
CD47-204ENST00000471694 CCDC58Q4VC31 144 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 C22orf42Q6IC83 251 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 ESPNLQ6ZVH7 1005 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 GLIS1Q8NBF1 620 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 GPR150Q8NGU9 434 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 OR5W2Q8NH69 310 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CITED4Q96RK1 184 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 NICN1Q9BSH3 213 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 MS4A7Q9GZW8 240 aaPredicted RBP7.91□□□□□ -1.14
CD47-204ENST00000471694 KCNMB2Q9Y691 235 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CAMLGP49069 296 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CXCR4P61073 352 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 HOXA4Q00056 320 aaPredicted RBP7.91□□□□□ -1.14
CD47-204ENST00000471694 CLN3Q13286 438 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CLEC2AQ6UVW9 174 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CPOQ8IVL8 374 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 BTNL2Q9UIR0 455 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 RNF6Q9Y252 685 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CLDN24A6NM45 220 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 AQP7O14520 342 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 OR8U8P0C7N1 319 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CPEP16870 476 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 GABRA4P48169 554 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 ZNF616Q08AN1 781 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 RAB41Q5JT25 222 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CLDN22Q8N7P3 220 aa7.91□□□□□ -1.14
CD47-204ENST00000471694 CCL17Q92583 94 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms