RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CLDN17P56750 224 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 VLDLRP98155 873 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 DGCR6Q14129 220 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 IQCCQ4KMZ1 466 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 TSPO2Q5TGU0 170 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 LCN8Q6JVE9 175 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 NIPAL3Q6P499 406 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 NHLRC1Q6VVB1 395 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
SDC3-203ENST00000471567 SSX8Q7RTT4 187 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
SDC3-203ENST00000471567 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 LRRC17Q8N6Y2 441 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 ZNF433Q8N7K0 673 aaPredicted RBP13.49□□□□□ -0.25
SDC3-203ENST00000471567 ASB9Q96DX5 294 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 RASSF1Q9NS23 344 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 C20orf141Q9NUB4 165 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 ATP5HO75947 161 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 STAMBPO95630 424 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 CRYGSP22914 178 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 AHCYP23526 432 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 SELENOPP49908 381 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 RASSF2P50749 326 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 SMIM11AP58511 58 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 MS4A2Q01362 244 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 PRKCDQ05655 676 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 FAPQ12884 760 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 TRAP1Q12931 704 aaKnown RBP13.48□□□□□ -0.25
SDC3-203ENST00000471567 FOXD4Q12950 439 aaPredicted RBP13.48□□□□□ -0.25
SDC3-203ENST00000471567 CYP2R1Q6VVX0 501 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 C22orf34Q6ZV56 151 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 NANOGNBQ7Z5D8 188 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 P2RY8Q86VZ1 359 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 HSD17B8Q92506 261 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 S100PBPQ96BU1 408 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 BPIFA2Q96DR5 249 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 DHRS1Q96LJ7 313 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 PIP5K1AQ99755 562 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 IL1RAPQ9NPH3 570 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 TAS2R5Q9NYW4 299 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 V9GYQ6 96 aa13.48□□□□□ -0.25
SDC3-203ENST00000471567 A0A087WUU8 490 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 TCRBV5S2A0A599 114 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 SLC43A1O75387 559 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 LYZL6O75951 148 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 KRT33AO76009 404 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 FABP3P05413 133 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 THBDP07204 575 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 IFI30P13284 250 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 HLA-DOBP13765 273 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 FUT4P22083 530 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 MPGP29372 298 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 POU3F1Q03052 451 aaPredicted RBP13.47□□□□□ -0.25
SDC3-203ENST00000471567 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 TIMM23BQ5SRD1 257 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 C1QTNF12Q5T7M4 302 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 OR7E24Q6IFN5 339 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 PGM2L1Q6PCE3 622 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 ZNF730Q6ZMV8 503 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 MBOAT2Q6ZWT7 520 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 RRM2BQ7LG56 351 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 PIWIL3Q7Z3Z3 882 aaKnown RBP13.47□□□□□ -0.25
SDC3-203ENST00000471567 TMEM200AQ86VY9 491 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 NRMQ8IXM6 262 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 CDK20Q8IZL9 346 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 C1orf162Q8NEQ5 155 aaPredicted RBP13.47□□□□□ -0.25
SDC3-203ENST00000471567 CLPTM1LQ96KA5 538 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 ZNF347Q96SE7 839 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 NOTCH2Q04721 2471 aa13.47□□□□□ -0.25
SDC3-203ENST00000471567 ITPR2Q14571 2701 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 CIB4A0PJX0 185 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ZNF726A6NNF4 738 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ZNF587BE7ETH6 402 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 BLOC1S5-TXNDC5H3BN57 136 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ACOT8O14734 319 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 RNF13O43567 381 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 PIP5K1CO60331 668 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 DNAJC8O75937 253 aaPredicted RBP13.46□□□□□ -0.25
SDC3-203ENST00000471567 HRGP04196 525 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ITGA5P08648 1049 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 DNAJA1P31689 397 aaKnown RBP13.46□□□□□ -0.25
SDC3-203ENST00000471567 ANKDD1AQ495B1 522 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ZDHHC21Q8IVQ6 265 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 SLC7A13Q8TCU3 470 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ZC3HAV1LQ96H79 300 aaKnown RBP13.46□□□□□ -0.25
SDC3-203ENST00000471567 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms