RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 A0A087WUJ7 227 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 MS4A18H0YCH9 400 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 GPRIN2O60269 458 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 THY1P04216 161 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 CECR9P0C854 216 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 CALCRP30988 508 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ARF1P84077 181 aaKnown RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 PPP2R2BQ00005 443 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 MST1LQ2TV78 715 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 MS4A18Q3C1V0 323 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 CARD17Q5XLA6 110 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 FAM91A1Q658Y4 838 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 HMBOX1Q6NT76 420 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ZNF544Q6NX49 715 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ULK3Q6PHR2 472 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 WDR88Q6ZMY6 472 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 H1FNTQ75WM6 255 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ABHD12BQ7Z5M8 362 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 DPP10Q8N608 796 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 DNAJA4Q8WW22 397 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 FBXO17Q96EF6 278 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 SLC47A1Q96FL8 570 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ADAD1Q96M93 576 aaKnown RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 SLC38A2Q96QD8 506 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ARHGDIGQ99819 225 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 EMC6Q9BV81 110 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 RABEP2Q9H5N1 569 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 FKRPQ9H9S5 495 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 BARX1Q9HBU1 254 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-203ENST00000471344 GPR35Q9HC97 309 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 MED4Q9NPJ6 270 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ABCA1O95477 2261 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ARFGEF3Q5TH69 2177 aa13.37□□□□□ -0.27
COL1A1-203ENST00000471344 ARPC4-TTLL3A0A0A6YYG9 625 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 PRORSD1PA6NEY8 169 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 H7C417 338 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 FBP2O00757 339 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 ANGPT2O15123 496 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 SLC43A1O75387 559 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 LYPD3O95274 346 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 CRYBA2P53672 197 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 UBE2NP61088 152 aaKnown RBP13.36□□□□□ -0.27
COL1A1-203ENST00000471344 NFYCQ13952 458 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 NRF1Q16656 503 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 C11orf65Q8NCR3 313 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 VANGL1Q8TAA9 524 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-203ENST00000471344 NANOS1Q8WY41 292 aaKnown RBP13.36□□□□□ -0.27
COL1A1-203ENST00000471344 TXNDC15Q96J42 360 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 MCHR1Q99705 422 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 TMEM120AQ9BXJ8 343 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 KAT8Q9H7Z6 458 aaKnown RBP13.36□□□□□ -0.27
COL1A1-203ENST00000471344 TMEM27Q9HBJ8 222 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 FGFR1OP2Q9NVK5 253 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 MED29Q9NX70 200 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 SVEP1Q4LDE5 3571 aa13.36□□□□□ -0.27
COL1A1-203ENST00000471344 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 RPL36A-HNRNPH2H7BZ11 118 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 M0QX08 132 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 M0R3G1 203 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 ATP8B1O43520 1251 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 OR2T1O43869 369 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 SERPINB7O75635 380 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 SERPINI2O75830 405 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 IGLV1-44P01699 117 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 CD247P20963 164 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 GZMMP51124 257 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 NAAAQ02083 359 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 POU3F1Q03052 451 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 RAB35Q15286 201 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 SWI5Q1ZZU3 235 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 C1QTNF12Q5T7M4 302 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 VHLLQ6RSH7 139 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 C5orf46Q6UWT4 87 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 RANBP3LQ86VV4 465 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 UEVLDQ8IX04 471 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 GPR137CQ8N3F9 429 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 ADPRHL1Q8NDY3 354 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 OR10H5Q8NGA6 315 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 OR10A6Q8NH74 314 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 SLC41A3Q96GZ6 507 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 SIKE1Q9BRV8 207 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 NOX3Q9HBY0 568 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 OBP2BQ9NPH6 170 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 CRNNQ9UBG3 495 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-203ENST00000471344 TRIM33Q9UPN9 1127 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
COL1A1-203ENST00000471344 CHD3Q12873 2000 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms