RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EMG1Q92979 244 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 DHRS4Q9BTZ2 278 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ABHD6Q9BV23 337 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CTDSP1Q9GZU7 261 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SPACA1Q9HBV2 294 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ATP13A2Q9NQ11 1180 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 MRPS28Q9Y2Q9 187 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 KPTNQ9Y664 436 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 A0A0A6YYC8 382 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 LOC285095A0A1B0GVY8 99 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PRAMEF25A6NGN4 478 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 I3L1I5 382 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ARHGAP33O14559 1287 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 DNPH1O43598 174 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 LDB3O75112 727 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SBK2P0C263 348 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SLURP2P0DP57 97 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OPRL1P41146 370 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 FKBP1AP62942 108 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF266Q14584 549 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OR2B11Q5JQS5 317 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PRAMEF5Q5TYX0 476 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PRAMEF6Q5VXH4 476 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 GGNBP1Q5YKI7 109 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 DHRS7BQ6IAN0 325 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 WDR74Q6RFH5 385 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM123Q8N131 208 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 C12orf76Q8N812 135 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OR13D1Q8NGV5 346 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 NETO1Q8TDF5 533 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CMTM3Q96MX0 182 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 LYSMD1Q96S90 227 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 MACROD1Q9BQ69 325 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 RIMS4Q9H426 269 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SLC6A20Q9NP91 592 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 EMC7Q9NPA0 242 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 EXOSC3Q9NQT5 275 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OR1A1Q9P1Q5 309 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ANKMY1Q9P2S6 941 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ADAMTS6Q9UKP5 1117 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ROBO3Q96MS0 1386 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PEAK1Q9H792 1746 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 MEIOCA2RUB1 952 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF724A8MTY0 619 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SLC16A6O15403 523 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CACNG3O60359 315 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ADAM11O75078 769 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PDGFBP01127 241 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CCL5P13501 91 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ELAVL4P26378 380 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 BLVRBP30043 206 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CASP3P42574 277 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 RABIFP47224 123 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF280AP59817 542 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 FKBP1BP68106 108 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 FAM189BP81408 668 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SLC10A6Q3KNW5 377 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CHCHD4Q8N4Q1 142 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OR5K2Q8NHB8 316 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ITPKCQ96DU7 683 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SUSD3Q96L08 255 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 INPP5KQ9BT40 448 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SEZ6LQ9BYH1 1024 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 UCK1Q9HA47 277 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PARD6AQ9NPB6 346 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SPHK2Q9NRA0 654 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SPHK1Q9NYA1 384 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ENPP5Q9UJA9 477 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 KIF1AQ12756 1690 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 NSG1A0A0A6YYJ2 146 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SIX6O95475 246 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SEMA4FO95754 770 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PMCHP20382 165 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 MARCH8Q5T0T0 291 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 CLEC9AQ6UXN8 241 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 OR5AS1Q8N127 324 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ENDOVQ8N8Q3 282 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 B3GNT7Q8NFL0 401 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 RAB7BQ96AH8 199 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 FCRL1Q96LA6 429 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ARHGDIGQ99819 225 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 NTPCRQ9BSD7 190 aaKnown RBP6.42□□□□□ -1.38
BRCA1-210ENST00000471181 ARHGAP39Q9C0H5 1083 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SMOC2Q9H3U7 446 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 POPDC3Q9HBV1 291 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 UBQLN4Q9NRR5 601 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 RIMS3Q9UJD0 308 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 PPP1R3CQ9UQK1 317 aa6.42□□□□□ -1.38
BRCA1-210ENST00000471181 SMLR1H3BR10 107 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 H7C1C5 153 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 RNASE1P07998 156 aaKnown RBP6.41□□□□□ -1.38
BRCA1-210ENST00000471181 ELK1P19419 428 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 PTGER1P34995 402 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 LCN6P62502 163 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 ZP2Q05996 745 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 EXOSC7Q15024 291 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms