RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CAMK2AQ9UQM7 478 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 FREM2Q5SZK8 3169 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 TEX13CA0A0J9YWL9 993 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 A0A1W2PNV4 684 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 IRGMA1A4Y4 181 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 ZNF726A6NNF4 738 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 K7EM74 188 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 AQP7O14520 342 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 CXCL13O43927 109 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 PRKYO43930 277 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 SMNDC1O75940 238 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCM2-204ENST00000470837 IGHG3P01860 377 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 CCDC159P0C7I6 412 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 NR2C1P13056 603 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 ZNF708P17019 499 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 ATP6V1E1P36543 226 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 ACVR1BP36896 505 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 LHX2P50458 406 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 AGFG1P52594 562 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 SLC16A1P53985 500 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 FXYD6P3P58550 94 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 CXCR4P61073 352 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 RPL27P61353 136 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCM2-204ENST00000470837 KRR1Q13601 381 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 KRTCAP3Q53RY4 240 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 RNFT1Q5M7Z0 435 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 GTF2IRD2BQ6EKJ0 949 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 VASNQ6EMK4 673 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 SLC35D2Q76EJ3 337 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 CXXC5Q7LFL8 322 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 ADCK1Q86TW2 530 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 GTF2IRD2Q86UP8 949 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 GGNQ86UU5 652 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 GHDCQ8N2G8 530 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 FAM26EQ8N5C1 309 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 OR4K13Q8NH42 304 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 SF3B5Q9BWJ5 86 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 TXNIPQ9H3M7 391 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 CCNB1IP1Q9NPC3 277 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 UBAP1Q9NZ09 502 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 EMC3Q9P0I2 261 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 LUZP4Q9P127 313 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 GPR52Q9Y2T5 361 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 ADAM18Q9Y3Q7 739 aa8.75□□□□□ -1.01
CCM2-204ENST00000470837 RPL36Q9Y3U8 105 aaKnown RBP8.75□□□□□ -1.01
CCM2-204ENST00000470837 DCHS1Q96JQ0 3298 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 DOCK10Q96BY6 2186 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 OR14I1A6ND48 311 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 EFCAB10A6NFE3 127 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 NPIPB13A6NJU9 1138 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 NPIPB4C9JG80 1138 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 PTGES3LE9PB15 166 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 MS4A18H0YCH9 400 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 M0R129 80 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SLC1A7O00341 560 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 PRODHO43272 600 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ARHGEF9O43307 516 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 TXNDC12O95881 172 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 TSPAN19P0C672 248 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 FCGR2AP12318 317 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 CPN1P15169 458 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 IFNGR1P15260 489 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 HIST1H1CP16403 213 aaKnown RBP8.74□□□□□ -1.01
CCM2-204ENST00000470837 FMO3P31513 532 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 CDH11P55287 796 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 CLDN18P56856 261 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 C19orf57Q0VDD7 668 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ITGADQ13349 1161 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 FHL1Q13642 323 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ACKR1Q16570 336 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 OCLNQ16625 522 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 MS4A18Q3C1V0 323 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 LINC00303Q3SY05 128 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 NADK2Q4G0N4 442 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 KLHL12Q53G59 568 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SLC25A30Q5SVS4 291 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 LCN1P1Q5VSP4 162 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 EEF1A1P5Q5VTE0 462 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 NXNL2Q5VZ03 156 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 PLBD1Q6P4A8 553 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 LEG1Q6P5S2 330 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 DNM1P34Q6PK57 102 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 FCRLAQ7L513 359 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 P4HA3Q7Z4N8 544 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 CCDC71Q8IV32 467 aaPredicted RBP8.74□□□□□ -1.01
CCM2-204ENST00000470837 CPOQ8IVL8 374 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 KDM8Q8N371 416 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 STX19Q8N4C7 294 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ARIH2OSQ8N7S6 290 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 EXD3Q8N9H8 876 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 LRRC75AQ8NAA5 344 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ZNF540Q8NDQ6 660 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SDR9C7Q8NEX9 313 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 IPCEF1Q8WWN9 437 aaPredicted RBP8.74□□□□□ -1.01
CCM2-204ENST00000470837 MYDGFQ969H8 173 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms