RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 EFCAB7A8K855 629 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 C2orf74A8MZ97 194 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SNURFLB1AK76 121 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SGK494L7N484 410 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MANBAO00462 879 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SDHDO14521 159 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SOCS3O14543 225 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TM9SF1O15321 606 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 NUDT21O43809 227 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DUX1O43812 170 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 IDH3BO43837 385 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SNNO75324 88 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ALOX12BO75342 701 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 EEDO75530 441 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 HSPA4LO95757 839 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SERPINE1P05121 402 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CSN3P07498 182 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 HIST1H2AGP0C0S8 130 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 C1GALT1C1LP0DN25 315 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ALPPL2P10696 532 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 NEFHP12036 1026 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 RPL35AP18077 110 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 IL1RNP18510 177 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SHC1P29353 583 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SHMT2P34897 504 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SLC26A3P40879 764 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 OR1D4P47884 311 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CCNG1P51959 295 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 HNRNPFP52597 415 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DNAJB13P59910 316 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CDKL1Q00532 357 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 REEP5Q00765 189 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 IRF8Q02556 426 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 RBPJQ06330 500 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 STX3Q13277 289 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 RAPSNQ13702 412 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TGIF1Q15583 401 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 EXT1Q16394 746 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MOGAT2Q3SYC2 334 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CCDC153Q494R4 210 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 HSP90B2PQ58FF3 399 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TOR1AIP1Q5JTV8 583 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CFAP157Q5JU67 520 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CAPN13Q6MZZ7 669 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 FAM199XQ6PEV8 388 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 GPRIN3Q6ZVF9 776 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 LRRC70Q7Z2Q7 622 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 RABEPKQ7Z6M1 372 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 C17orf64Q86WR6 236 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 KLHDC8AQ8IYD2 350 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 PRSS58Q8IYP2 241 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TWIST2Q8WVJ9 160 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DYDC1Q8WWB3 177 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ROBO4Q8WZ75 1007 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ATP6V1E2Q96A05 226 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 OMA1Q96E52 524 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MUS81Q96NY9 551 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF317Q96PQ6 595 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 OR2A5Q96R48 311 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DCTN5Q9BTE1 182 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 C1orf50Q9BV19 199 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF717Q9BY31 904 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ACPTQ9BZG2 426 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DRC3Q9H069 523 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ACTR8Q9H981 624 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 KCNK13Q9HB14 408 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MED4Q9NPJ6 270 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 LHX9Q9NQ69 397 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 GSN-AS1Q9NRJ2 163 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SOHLH2Q9NX45 425 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SPATA7Q9P0W8 599 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 C5AR2Q9P296 337 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DHCR7Q9UBM7 475 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 PISDQ9UG56 409 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 PILRAQ9UKJ1 303 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 SATB2Q9UPW6 733 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 CCL27Q9Y4X3 112 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 POLR3HQ9Y535 204 aaPredicted RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 DNAJC15Q9Y5T4 150 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 HEBP2Q9Y5Z4 205 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MED13Q9UHV7 2174 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 NCOR2Q9Y618 2525 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 ATMQ13315 3056 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 DOCK10Q96BY6 2186 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 A0A0A6YYC8 382 aaPredicted RBP3.37□□□□□ -1.87
COL9A1-206ENST00000470652 TRAV24A0A0B4J272 114 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 TRBV5-5A0A0J9YX44 114 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 A0A1W2PPK0 400 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 TLCD2A6NGC4 264 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 OR5K4A6NMS3 321 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 SYCE1LA8MT33 242 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 E9PBE3 544 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 H3BMH7 237 aa3.37□□□□□ -1.87
COL9A1-206ENST00000470652 I3L1I5 382 aaPredicted RBP3.37□□□□□ -1.87
COL9A1-206ENST00000470652 PLPP1O14494 284 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms