RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 BTLAQ7Z6A9 289 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 GALNT5Q7Z7M9 940 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 OXGR1Q96P68 337 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ALPK1Q96QP1 1244 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 REEP1Q9H902 201 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 KCNJ16Q9NPI9 418 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ARMC1Q9NVT9 282 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 PROCRQ9UNN8 238 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 HIF3AQ9Y2N7 669 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 FAM90A27PA6NNH2 459 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 A8MXE2 369 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 EEF1E1-BLOC1S5C9J1V9 151 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 MS4A18H0YCH9 400 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 EEF1E1O43324 174 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 KLF4O43474 513 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 CST1P01037 141 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 FUT1P19526 365 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 MAKP20794 623 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 CBLP22681 906 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 UQCRC1P31930 480 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 OMPP47874 163 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR3A2P47893 321 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 SLC9A3P48764 834 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 PMS2P3Q13401 168 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 EXOC3L2Q2M3D2 409 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 MS4A18Q3C1V0 323 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 SP5Q6BEB4 398 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 TBPL2Q6SJ96 375 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 TFAP2EQ6VUC0 442 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 CREB3L2Q70SY1 520 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 PXKQ7Z7A4 578 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 GPAT4Q86UL3 456 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 EPHX4Q8IUS5 362 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 CDK20Q8IZL9 346 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 RCE1Q9Y256 329 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 NOSIPQ9Y314 301 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 NOX1Q9Y5S8 564 aa13.25□□□□□ -0.29
CDC42SE1-203ENST00000470278 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 NPIPB13A6NJU9 1138 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 EFCAB9A8MZ26 197 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 NPIPB4C9JG80 1138 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 TRAF3IP2O43734 574 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HPRP00739 348 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HIST1H2ABP04908 130 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF43P17038 809 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 IFNGR2P38484 337 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 FOXD4Q12950 439 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 KPNB1Q14974 876 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF770Q6IQ21 691 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 NHLRC1Q6VVB1 395 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HIST3H2AQ7L7L0 130 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 NUFIP2Q7Z417 695 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 STK32CQ86UX6 486 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZIC4Q8N9L1 334 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HIST1H2ACQ93077 130 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 LRRC46Q96FV0 321 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 UCK2Q9BZX2 261 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 PARPBPQ9NWS1 579 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 TAS2R5Q9NYW4 299 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 DNAJB9Q9UBS3 223 aa13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HRNRQ86YZ3 2850 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-203ENST00000470278 HCFC1P51610 2035 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 NKX2-6A6NCS4 301 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 PRSS44E7EML9 344 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 CDC42EP2O14613 210 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 SMNDC1O75940 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR6A2O95222 327 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 ADORA3P0DMS8 318 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 FCGR1AP12314 374 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 FPR3P25089 353 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 NTF4P34130 210 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 GPR4P46093 362 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 ERFP50548 548 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 POU3F1Q03052 451 aaPredicted RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 FHL1Q13642 323 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 C1orf94Q6P1W5 598 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZER1Q7Z7L7 766 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 OAFQ86UD1 273 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 UEVLDQ8IX04 471 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 C10orf67Q8IYJ2 551 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 KDM8Q8N371 416 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 RNASE6Q93091 150 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 APH1AQ96BI3 265 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF385AQ96PM9 386 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 OPN3Q9H1Y3 402 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms