RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LRTM1Q9HBL6 345 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 VNN3Q9NY84 501 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 PLEKHB1Q9UF11 243 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 SLC27A6Q9Y2P4 619 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 A0A1B0GVT2 93 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 G3V3Q6 166 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 SIAH2O43255 324 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 LANCL1O43813 399 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 FMO6PO60774 539 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 DNAJB6O75190 326 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 MLYCDO95822 493 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 HLA-DQB1P01920 261 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 ANXA4P09525 319 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 FOLR2P14207 255 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 CERS1P27544 350 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 IGFALSP35858 605 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 FOXL2P58012 376 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 PSMA6P60900 246 aaKnown RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 DMWDQ09019 674 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 NNATQ16517 81 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 KCNMB1Q16558 191 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 CLEC14AQ86T13 490 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 ZDHHC21Q8IVQ6 265 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 MMP21Q8N119 569 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 OR13C3Q8NGS6 347 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 THAP7Q9BT49 309 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 DDA1Q9BW61 102 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 PCTPQ9UKL6 214 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 SGK494L7N484 410 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 TACR1P25103 407 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 AOAHP28039 575 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 TACR3P29371 465 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 THBS4P35443 961 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 RAD52P43351 418 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 SLC26A5P58743 744 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
NUP50-214ENST00000469163 TIAL1Q01085 375 aaKnown RBP eCLIP9.15□□□□□ -0.94
NUP50-214ENST00000469163 GAB4Q2WGN9 574 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 ACTBL2Q562R1 376 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 SPANXN4Q5MJ08 99 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 FGD2Q7Z6J4 655 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 OOSP2Q86WS3 158 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 CNTN4Q8IWV2 1026 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 JAGN1Q8N5M9 183 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 OR1S2Q8NGQ3 325 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 RHBDF1Q96CC6 855 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 APIPQ96GX9 242 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 MSLNLQ96KJ4 702 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 TEX37Q96LM6 180 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 PARPBPQ9NWS1 579 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 SH2B3Q9UQQ2 575 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 PATE3B3GLJ2 98 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 RGS14O43566 566 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 HCRTR2O43614 444 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 F10P00742 488 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 MBPP02686 304 aaPredicted RBP9.15□□□□□ -0.94
NUP50-214ENST00000469163 ABOP16442 354 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 IL1RNP18510 177 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 GGT1P19440 569 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 TLX1P31314 330 aaPredicted RBP9.15□□□□□ -0.94
NUP50-214ENST00000469163 ITGA1P56199 1179 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 PPP1CAP62136 330 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 GAS6Q14393 721 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 INPP5JQ15735 1006 aaPredicted RBP9.15□□□□□ -0.94
NUP50-214ENST00000469163 OR4F3Q6IEY1 312 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 FIGNL1Q6PIW4 674 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 DCXRQ7Z4W1 244 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 ZNF547Q8IVP9 402 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 B3GNT7Q8NFL0 401 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 OR2L3Q8NG85 312 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 BBS10Q8TAM1 723 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 KCNJ15Q99712 375 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 MRI1Q9BV20 369 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 CHST5Q9GZS9 411 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 HHATLQ9HCP6 504 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 MRPS18CQ9Y3D5 142 aaKnown RBP9.15□□□□□ -0.94
NUP50-214ENST00000469163 MAP4K5Q9Y4K4 846 aa9.15□□□□□ -0.94
NUP50-214ENST00000469163 M0R143 59 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 ERI3O43414 337 aaKnown RBP9.15□□□□□ -0.95
NUP50-214ENST00000469163 LAMTOR5O43504 91 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 AGAP20933 346 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 HNRNPA2B1P22626 353 aaKnown RBP9.15□□□□□ -0.95
NUP50-214ENST00000469163 CEACAM8P31997 349 aaPredicted RBP9.15□□□□□ -0.95
NUP50-214ENST00000469163 GSG1Q2KHT4 349 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 DEFB134Q4QY38 66 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 SPIN4Q56A73 249 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 ATPAF1Q5TC12 328 aaPredicted RBP9.15□□□□□ -0.95
NUP50-214ENST00000469163 PRAMEF17Q5VTA0 474 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 LYPLAL1Q5VWZ2 237 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 CPZQ66K79 652 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 LYPD4Q6UWN0 246 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 CASP12Q6UXS9 341 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 ZNF687Q8N1G0 1237 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 C15orf54Q8N8G6 183 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 OR52P1PQ8NH57 321 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 OR4C6Q8NH72 309 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.95
NUP50-214ENST00000469163 OR1F2PQ96R84 312 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms