RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 CA10Q9NS85 328 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.357e-7■■□□□ 11.9
SDCCAG3-209ENST00000468963 TRAV36DV7A0A075B6V5 113 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 B9A039 149 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 M0R082 166 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 AIM2O14862 343 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC43A1O75387 559 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 USF1P22415 310 aaPredicted RBP12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 GRPRP30550 384 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 CALCRP30988 508 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 CHRFAM7AQ494W8 412 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 ALG10BQ5I7T1 473 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 FAM91A1Q658Y4 838 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 CYB5R2Q6BCY4 276 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 ULK3Q6PHR2 472 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 TMEM123Q8N131 208 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF417Q8TAU3 575 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC41A3Q96GZ6 507 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 SPATA5L1Q9BVQ7 753 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 MOV10Q9HCE1 1003 aaKnown RBP12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
SDCCAG3-209ENST00000468963 A0A087WUJ7 227 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 PDE5AO76074 875 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 HPRP00739 348 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 IFNA2P01563 188 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR4A8P0C604 315 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 HLA-DOBP13765 273 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 GTF2E2P29084 291 aaKnown RBP12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 PDLIM4P50479 330 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 ATP4BP51164 291 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 AQP5P55064 265 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 C1DQ13901 141 aaKnown RBP12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR1Q1Q15612 314 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 EFNB3Q15768 340 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 CEACAM16Q2WEN9 425 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 AGKQ53H12 422 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 PHYHD1Q5SRE7 291 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 MYPOPQ86VE0 399 aaPredicted RBP12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 ADPRHL1Q8NDY3 354 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR4F15Q8NGB8 312 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 LRRC8CQ8TDW0 803 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC47A1Q96FL8 570 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR2M2Q96R28 347 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 CRLF2Q9HC73 371 aa12.84□□□□□ -0.35
SDCCAG3-209ENST00000468963 A0A0B4J2E0 115 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 A0A1B0GX12 115 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 TMEM129A0AVI4 362 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 NDUFS8O00217 210 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 MFN2O95140 757 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 BGLAPP02818 100 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 CELA3BP08861 270 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 CBLP22681 906 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 SLC6A2P23975 617 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 NR4A2P43354 598 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 SNRPD2P62316 118 aaKnown RBP12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 SCARB2Q14108 478 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 MFSD13AQ14CX5 517 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 RUNDC3AQ59EK9 446 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 GPR137CQ8N3F9 429 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 ANKS4BQ8N8V4 417 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 PIK3C3Q8NEB9 887 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 NUP37Q8NFH4 326 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 BHLHE22Q8NFJ8 381 aaPredicted RBP12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 TXNDC15Q96J42 360 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 LRR1Q96L50 414 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 FOXN4Q96NZ1 517 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 DOK1Q99704 481 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 TMEM27Q9HBJ8 222 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 TESQ9UGI8 421 aaKnown RBP12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.36
SDCCAG3-209ENST00000468963 LOC390937A0A1W2PQ73 354 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 SERPINB7O75635 380 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 FAM157CP0CG43 387 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 THBS4P35443 961 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 ARR3P36575 388 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 CDH12P55289 794 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 VHLLQ6RSH7 139 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 PTOV1Q86YD1 416 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 WDFY1Q8IWB7 410 aa12.82□□□□□ -0.36
SDCCAG3-209ENST00000468963 UEVLDQ8IX04 471 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms